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AT4G30020.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
extracellular 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:24665109 (2014): extracellular region plant-type cell wall
  • PMID:21433285 (2011): plasma membrane
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : PA-domain containing subtilase family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
PA-domain containing subtilase family protein; FUNCTIONS IN: identical protein binding, serine-type endopeptidase activity; INVOLVED IN: proteolysis, negative regulation of catalytic activity; LOCATED IN: endomembrane system, cell wall, membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protease-associated PA (InterPro:IPR003137), Proteinase inhibitor, propeptide (InterPro:IPR009020), Peptidase S8A, DUF1034 C-terminal (InterPro:IPR010435), Peptidase S8/S53, subtilisin/kexin/sedolisin (InterPro:IPR000209), Peptidase S8, subtilisin-related (InterPro:IPR015500), Peptidase S8/S53, subtilisin, active site (InterPro:IPR022398), Proteinase inhibitor I9, subtilisin propeptide (InterPro:IPR010259); BEST Arabidopsis thaliana protein match is: subtilisin-like serine protease 3 (TAIR:AT2G19170.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT4G30020-MONOMEREC:3.4.21.-eggNOG:COG1404EMBL:AK226227EMBL:AL078464EMBL:AL161576EMBL:AY139780
EMBL:BT005822EMBL:CP002687EnsemblPlants:AT4G30020EnsemblPlants:AT4G30020.1entrez:829125Gene3D:3.30.70.80Gene3D:3.40.50.200
GeneID:829125GO:GO:0004252GO:GO:0005576GO:GO:0005618GO:GO:0016020Gramene:AT4G30020.1hmmpanther:PTHR10795
hmmpanther:PTHR10795:SF431HOGENOM:HOG000238262InterPro:IPR000209InterPro:IPR009020InterPro:IPR010259InterPro:IPR010435InterPro:IPR015500
InterPro:IPR023827InterPro:IPR023828KEGG:ath:AT4G30020MEROPS:S08.A02OMA:HPSNFNSPANTHER:PTHR10795Pfam:PF00082
Pfam:PF02225Pfam:PF05922Pfam:PF06280PhylomeDB:Q9SZV5PIR:T08978PRINTS:PR00723PROSITE:PS00136
PROSITE:PS00138Proteomes:UP000006548RefSeq:NP_567839.1scanprosite:PS00136scanprosite:PS00138SMR:Q9SZV5STRING:3702.AT4G30020.1
SUPFAM:SSF52743SUPFAM:SSF54897TAIR:AT4G30020TMHMM:TMhelixUniGene:At.43248UniProt:Q9SZV5
Coordinates (TAIR10) chr4:+:14678251..14681762
Molecular Weight (calculated) 87509.40 Da
IEP (calculated) 7.31
GRAVY (calculated) -0.09
Length 816 amino acids
Sequence (TAIR10)
(BLAST)
001: MDIGCKVLVF FTCFLTVTAE IYIVTMEGEP IISYKGGDNG FEATAVESDE KIDTTSELVT SYARHLERKH DMLLGMLFVE GSYKKLYSYK HLINGFAAHV
101: SPDQAEMLRR APGVKSVDRD WKVRKLTTHT PQFLGLPTDV WPTGGGYDRA GEDIVIGFID SGIFPHHPSF ASHHTTVPYG PHPSYKGKCE EDPHTKISFC
201: NGKIIGAQHF AEAAKAAGAF NPDIDFASPM DGDGHGSHTA AIAAGNNGIP VRMHGYEFGK ASGMAPRARI AVYKALYRLF GGFVADVVAA IDQAVHDGVD
301: ILSLSVGPNS PPATTKTTFL NPFDATLLGA VKAGVFVAQA AGNGGPFPKT LVSYSPWITT VAAAIDDRRY KNHLTLGNGK MLAGIGLSPS TRPHRSYKMV
401: SANDVLLGSS GMKYNPSDCQ KPEVLNKKLV EGNILLCGYS FNFVAGSASI KKVAETAKHL GAAGFVLVVE NVSPGTKFDP VPSCIPGILI TDVSKSMDLI
501: DYYNVTTSRD WMGRVKDFKA EGSIGDGLEP ILHKSAPEVA LFSARGPNTK DFSFQDADLL KPDILAPGSL IWSAWSANGT DEANYIGEGF ALISGTSMAA
601: PHIAGIAALV KQKHPQWSPA AIKSALMTTS TVIDRAGRPL QAQQYSETET VTLVKATPFD YGSGHVNPSA ALDPGLIFDA GYEDYIGFLC TTPGIDAHEI
701: KNFTNTPCNF KMVHPSNFNT PSIAISHLVR TQTVTRRVTN VAEEEETYTI TSRMEPAIAI EVSPPAMTVR AGASRTFSVT LTVRSVTGAY SFGQVTLKGS
801: RGHKVTLPVV AMGQRR
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)