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AT4G29900.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
plasma membrane 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:26781341 (2016): plasma membrane
  • PMID:25900983 (2015): Golgi trans-Golgi network
  • PMID:25900983 (2015): Golgi trans-Golgi network early endosome
  • PMID:25641898 (2015): plasma membrane
  • PMID:22923678 (2012): plasma membrane
  • PMID:22318864 (2012): plasma membrane
  • PMID:22215637 (2012): plasma membrane
  • PMID:21433285 (2011): plasma membrane
  • PMID:20843791 (2010): plasma membrane
  • PMID:20374526 (2010): plasma membrane
  • PMID:19334764 (2009): plasma membrane
  • PMID:17644812 (2007): plasma membrane
  • PMID:17317660 (2007): plasma membrane
  • PMID:16635983 (2006): plasma membrane
  • PMID:16618929 (2006): plasma membrane
  • PMID:15574830 (2004): plasma membrane
  • PMID:15308754 (2004): plasma membrane
  • PMID:14506206 (2003): plasma membrane
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : autoinhibited Ca(2+)-ATPase 10
Curator
Summary (TAIR10)
one of the type IIB calcium pump isoforms. encodes an autoinhibited Ca(2+)-ATPase that contains an N-terminal calmodulin binding autoinhibitory domain.
Computational
Description (TAIR10)
autoinhibited Ca(2+)-ATPase 10 (ACA10); FUNCTIONS IN: calcium-transporting ATPase activity, calmodulin binding; INVOLVED IN: shoot development, inflorescence morphogenesis; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, P-type, ATPase-associated domain (InterPro:IPR008250), ATPase, P-type, calcium-transporting, PMCA-type (InterPro:IPR006408), ATPase, P-type cation-transporter, N-terminal (InterPro:IPR004014), ATPase, P-type cation exchange, alpha subunit (InterPro:IPR006069), Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter (InterPro:IPR001757), ATPase, P-type phosphorylation site (InterPro:IPR018303), ATPase, P-type cation-transporter, C-terminal (InterPro:IPR006068); BEST Arabidopsis thaliana protein match is: autoinhibited Ca2+ -ATPase, isoform 8 (TAIR:AT5G57110.2); Has 46568 Blast hits to 34154 proteins in 3167 species: Archae - 903; Bacteria - 32081; Metazoa - 4140; Fungi - 2685; Plants - 2119; Viruses - 3; Other Eukaryotes - 4637 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT4G29900-MONOMERBioGrid:14399EC:3.6.3.8eggNOG:ENOG410XNNCeggNOG:KOG0204EMBL:AL050352EMBL:AL161575
EMBL:CP002687EnsemblPlants:AT4G29900EnsemblPlants:AT4G29900.1entrez:829112Gene3D:1.20.1110.10Gene3D:3.40.1110.10GeneID:829112
Genevisible:Q9SZR1GO:GO:0005388GO:GO:0005524GO:GO:0005886GO:GO:0005887GO:GO:0009506GO:GO:0043231
GO:GO:0046872Gramene:AT4G29900.1hmmpanther:PTHR24093hmmpanther:PTHR24093:SF359HOGENOM:HOG000265623InParanoid:Q9SZR1InterPro:IPR001757
InterPro:IPR004014InterPro:IPR006068InterPro:IPR006408InterPro:IPR008250InterPro:IPR018303InterPro:IPR023214InterPro:IPR023298
InterPro:IPR023299InterPro:IPR024750iPTMnet:Q9SZR1KEGG:ath:AT4G29900KO:K01537OMA:GGVHEICPaxDb:Q9SZR1
Pfam:PF00122Pfam:PF00689Pfam:PF00690Pfam:PF00702Pfam:PF12515Pfam:Q9SZR1PhylomeDB:Q9SZR1
PIR:C85349PIR:T08551PRIDE:Q9SZR1PRO:PR:Q9SZR1PROSITE:PS00154ProteinModelPortal:Q9SZR1Proteomes:UP000006548
Reactome:R-ATH-418359Reactome:R-ATH-5578775Reactome:R-ATH-936837RefSeq:NP_194719.1scanprosite:PS00154SMART:SM00831SMR:Q9SZR1
STRING:3702.AT4G29900.1SUPFAM:0049471SUPFAM:0049473SUPFAM:SSF56784SUPFAM:SSF81660SwissPalm:Q9SZR1TAIR:AT4G29900
tair10-symbols:ACA10tair10-symbols:ATACA10tair10-symbols:CIF1TIGRfam:TIGR01494TIGRfam:TIGR01517TIGRFAMs:TIGR01494TIGRFAMs:TIGR01517
TMHMM:TMhelixUniGene:At.31882UniGene:At.48920UniProt:Q9SZR1
Coordinates (TAIR10) chr4:-:14611225..14618775
Molecular Weight (calculated) 116865.00 Da
IEP (calculated) 6.14
GRAVY (calculated) 0.04
Length 1069 amino acids
Sequence (TAIR10)
(BLAST)
0001: MSGQFNNSPR GEDKDVEAGT SSFTEYEDSP FDIASTKNAP VERLRRWRQA ALVLNASRRF RYTLDLKREE DKKQMLRKMR AHAQAIRAAH LFKAAASRVT
0101: GIASPLPTPG GGDFGIGQEQ IVSISRDQNI GALQELGGVR GLSDLLKTNL EKGIHGDDDD ILKRKSAFGS NTYPQKKGRS FWRFVWEASQ DLTLIILIVA
0201: AVASLALGIK TEGIEKGWYD GISIAFAVLL VIVVTATSDY RQSLQFQNLN EEKRNIRLEV TRDGRRVEIS IYDIVVGDVI PLNIGDQVPA DGVLVAGHSL
0301: AVDESSMTGE SKIVQKNSTK HPFLMSGCKV ADGNGTMLVT GVGVNTEWGL LMASVSEDNG GETPLQVRLN GVATFIGIVG LTVAGVVLFV LVVRYFTGHT
0401: KNEQGGPQFI GGKTKFEHVL DDLVEIFTVA VTIVVVAVPE GLPLAVTLTL AYSMRKMMAD KALVRRLSAC ETMGSATTIC SDKTGTLTLN EMTVVECYAG
0501: LQKMDSPDSS SKLPSAFTSI LVEGIAHNTT GSVFRSESGE IQVSGSPTER AILNWAIKLG MDFDALKSES SAVQFFPFNS EKKRGGVAVK SPDSSVHIHW
0601: KGAAEIVLGS CTHYMDESES FVDMSEDKMG GLKDAIDDMA ARSLRCVAIA FRTFEADKIP TDEEQLSRWE LPEDDLILLA IVGIKDPCRP GVKNSVLLCQ
0701: QAGVKVRMVT GDNIQTAKAI ALECGILASD SDASEPNLIE GKVFRSYSEE ERDRICEEIS VMGRSSPNDK LLLVQSLKRR GHVVAVTGDG TNDAPALHEA
0801: DIGLAMGIQG TEVAKEKSDI IILDDNFESV VKVVRWGRSV YANIQKFIQF QLTVNVAALV INVVAAISAG EVPLTAVQLL WVNLIMDTLG ALALATEPPT
0901: DHLMDRAPVG RREPLITNIM WRNLFIQAMY QVTVLLILNF RGISILHLKS KPNAERVKNT VIFNAFVICQ VFNEFNARKP DEINIFRGVL RNHLFVGIIS
1001: ITIVLQVVIV EFLGTFASTT KLDWEMWLVC IGIGSISWPL AVIGKLIPVP ETPVSQYFRI NRWRRNSSG
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)