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AT4G29735.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
plasma membrane 0.685
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0197 (InterPro:IPR007915); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Protein Annotations
EMBL:AK118618EMBL:AK228209EMBL:AY086637EMBL:BT025566EMBL:CP002687EnsemblPlants:AT4G29735EnsemblPlants:AT4G29735.1
entrez:829095ExpressionAtlas:Q8LCF2GeneID:829095GO:GO:0016021Gramene:AT4G29735.1hmmpanther:PTHR13636HOGENOM:HOG000241915
InterPro:IPR007915PANTHER:PTHR13636Pfam:PF05251PhylomeDB:Q8LCF2Proteomes:UP000006548RefSeq:NP_567832.1TAIR:AT4G29735
TMHMM:TMhelixUniGene:At.31892UniProt:Q8LCF2
Coordinates (TAIR10) chr4:-:14562962..14564277
Molecular Weight (calculated) 7939.90 Da
IEP (calculated) 10.11
GRAVY (calculated) 1.09
Length 76 amino acids
Sequence (TAIR10)
(BLAST)
1: MAAKPIASPI PVALYPTLSV FTLAIGLVIT AIFFIYEATS SRKNRSVGKE LATSAVASVF LGFGSLFLLL ASGVYV
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)