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AT4G29660.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
mitochondrion 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : embryo defective 2752
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
EMBRYO DEFECTIVE 2752 (EMB2752); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Protein Annotations
BioGrid:14374eggNOG:COG5130eggNOG:KOG3142EMBL:AF370473EMBL:AL079344EMBL:AL161575EMBL:AY064667
EMBL:AY085163EMBL:CP002687EnsemblPlants:AT4G29660EnsemblPlants:AT4G29660.1entrez:829087GeneID:829087Genevisible:Q94K18
GO:GO:0016021Gramene:AT4G29660.1hmmpanther:PTHR37898HOGENOM:HOG000030706KEGG:ath:AT4G29660OMA:FHKWEKTPaxDb:Q94K18
Pfam:Q94K18PhylomeDB:Q94K18PRIDE:Q94K18PRO:PR:Q94K18ProteinModelPortal:Q94K18Proteomes:UP000006548RefSeq:NP_567830.1
STRING:3702.AT4G29660.1TAIR:AT4G29660tair10-symbols:EMB2752TMHMM:TMhelixUniGene:At.19051UniProt:Q94K18
Coordinates (TAIR10) chr4:-:14534495..14535171
Molecular Weight (calculated) 12272.70 Da
IEP (calculated) 9.85
GRAVY (calculated) -0.43
Length 103 amino acids
Sequence (TAIR10)
(BLAST)
001: MQGVWSQLWR KYADYKYNKF ERFAVWEMIE PYRRPKTFTT LITIYVAAFY TGVIGAAVTE QLYKEKFWEE HPGKTVPLMK PVFYRGPWRV YRGEAIASDA
101: SSQ
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)