AT4G29560.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 0.976 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : | ||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
CONTAINS InterPro DOMAIN/s: Fanconi Anaemia group E protein, C-terminal (InterPro:IPR021025); Has 41 Blast hits to 41 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 10; Fungi - 0; Plants - 27; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). | ||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr4:-:14504421..14505999 | ||||||||||||||||||||||||
| Molecular Weight (calculated) | 55966.40 Da | ||||||||||||||||||||||||
| IEP (calculated) | 5.00 | ||||||||||||||||||||||||
| GRAVY (calculated) | -0.05 | ||||||||||||||||||||||||
| Length | 493 amino acids | ||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MEEWIPLFDI FLKSPSPEAE ASLWLDQASN LFSSSSSAAA PINRSSFVSL LKKQCDQNSS PVTKKVLFIE TLPNMVQSKI LSFLLFEYQR FCVSDLVWLA 101: REMLGSGGNK VVDFWVQRDA HNLLDRIPKP KFEWISNLDL DSADEDSMKQ VFDSVPDWLS EKLGSAGTIL PWLPVSCDDV DSEMLVVDSW NGKEITQIKE 201: DMEEDQREVV HNIDHTMTVG LQAHDHEMAV NLRAQISNFE STSEVLTLCN DIRRLCLEKG KDSLRVLALI EPWNADDETA AVLLSSLHNG SEEEELGWPS 301: HVLCSIVLPK FLSLEKSASR VLMSSTIEFC KIHQRAAEYA LVFPLILRKE GINNFICEVI SRVLKECLHL GQISGFCQKL LCGRTQERRF MFLPCHRDLI 401: SDELTWNEYL FILFQNILIH GIPLSQDSVD CLVSKVQELA ERYSKSLKFG NFLLHFTAKC APMLQAHKYQ LIESVKCTNS LVTKSILSKL NAL |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)