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AT4G29530.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
cytosol 0.738
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Pyridoxal phosphate phosphatase-related protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Pyridoxal phosphate phosphatase-related protein; FUNCTIONS IN: phosphatase activity, catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate phosphatase, PHOSPHO2 (InterPro:IPR016965), HAD-superfamily hydrolase, subfamily IB, PSPase-like (InterPro:IPR006383), Pyridoxal phosphate phosphatase-related (InterPro:IPR006384); BEST Arabidopsis thaliana protein match is: Pyridoxal phosphate phosphatase-related protein (TAIR:AT1G17710.1); Has 373 Blast hits to 361 proteins in 111 species: Archae - 0; Bacteria - 31; Metazoa - 175; Fungi - 16; Plants - 106; Viruses - 0; Other Eukaryotes - 45 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT4G29530-MONOMERDNASU:829074EC:3.6.1.1eggNOG:ENOG4111NAQ
eggNOG:KOG3120EMBL:AK229519EMBL:AL079344EMBL:AL161575
EMBL:BT006155EMBL:BT008523EMBL:CP002687EnsemblPlants:AT4G29530
EnsemblPlants:AT4G29530.1entrez:829074Gene3D:3.40.50.1000GeneID:829074
Genevisible:Q9SU92GO:GO:0004427GO:GO:0009229GO:GO:0016311
GO:GO:0042131GO:GO:0046872GO:GO:0051262Gramene:AT4G29530.1
hmmpanther:PTHR20889hmmpanther:PTHR20889:SF4HOGENOM:HOG000238030InParanoid:Q9SU92
InterPro:IPR006383InterPro:IPR006384InterPro:IPR016965InterPro:IPR023214
iPTMnet:Q9SU92KEGG:ath:AT4G29530KO:K13248OMA:CDLRIIS
PaxDb:Q9SU92Pfam:PF06888Pfam:Q9SU92PhylomeDB:Q9SU92
PIR:T09916PIRSF:PIRSF031051PRIDE:Q9SU92PRO:PR:Q9SU92
ProteinModelPortal:Q9SU92Proteomes:UP000006548Reactome:R-ATH-1483191Reactome:R-ATH-1483213
RefSeq:NP_194682.1STRING:3702.AT4G29530.1SUPFAM:SSF56784TAIR:AT4G29530
TIGRfam:TIGR01488TIGRfam:TIGR01489TIGRFAMs:TIGR01488TIGRFAMs:TIGR01489
UniGene:At.31912UniProt:Q9SU92
Coordinates (TAIR10) chr4:+:14496164..14497310
Molecular Weight (calculated) 28054.70 Da
IEP (calculated) 5.01
GRAVY (calculated) -0.28
Length 245 amino acids
Sequence (TAIR10)
(BLAST)
001: MAKIVILFDF DRTLIDGDSD NWVVTEMGLT EIFHQLRFTL PWNRLMDRMM MELQSQGRSI DDIKSCLKKM PIDSHIIEAI KSAKSSGCDL KIVSDANQFF
101: IEKILEHHDL VDCFSEIYTN PTSLDDNGNL RILPYHSDAL PPHSCNLCPS NLCKGLVMDH LRASSSNDQI PRRFIYLGDG GGDFCPTLKL RECDFVMPRT
201: NYPLWKKISD NPLLIKAEVK EWSSAEEQQR ILLQLVSTIT KEEDS
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)