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AT4G29490.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
plastid 0.995
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Metallopeptidase M24 family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Metallopeptidase M24 family protein; FUNCTIONS IN: manganese ion binding, aminopeptidase activity; INVOLVED IN: cellular process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M24B, X-Pro dipeptidase/aminopeptidase P N-terminal (InterPro:IPR007865), Peptidase M24, structural domain (InterPro:IPR000994); BEST Arabidopsis thaliana protein match is: Metallopeptidase M24 family protein (TAIR:AT1G09300.1); Has 11688 Blast hits to 11680 proteins in 2580 species: Archae - 275; Bacteria - 8182; Metazoa - 386; Fungi - 373; Plants - 96; Viruses - 0; Other Eukaryotes - 2376 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT4G29490-MONOMEReggNOG:COG0006eggNOG:KOG2737EMBL:AK227089EMBL:CP002687EnsemblPlants:AT4G29490EnsemblPlants:AT4G29490.1
entrez:829070Gene3D:3.40.350.10Gene3D:3.90.230.10GeneID:829070GO:GO:0004177GO:GO:0030145Gramene:AT4G29490.1
hmmpanther:PTHR10804hmmpanther:PTHR10804:SF100HOGENOM:HOG000008763InterPro:IPR000994InterPro:IPR007865InterPro:IPR028980InterPro:IPR029149
KEGG:ath:AT4G29490KO:K14213merops:M24.007OMA:GCYGVIDPfam:PF00557Pfam:PF05195PhylomeDB:Q0WUQ7
Proteomes:UP000006548RefSeq:NP_194678.2SMART:SM01011SMR:Q0WUQ7STRING:3702.AT4G29490.1SUPFAM:SSF53092SUPFAM:SSF55920
TAIR:AT4G29490UniGene:At.48919UniProt:Q0WUQ7
Coordinates (TAIR10) chr4:+:14487943..14491321
Molecular Weight (calculated) 54404.30 Da
IEP (calculated) 6.17
GRAVY (calculated) -0.20
Length 486 amino acids
Sequence (TAIR10)
(BLAST)
001: MSSLSPPPIP MELHAGNRKK LLESIRRQLS SSNRSLDGFV LLQGGEEKNR YCTDHTELFR QESYFAYLFG VREPDFYGAI DIGSGKSILF IPRLPDDYAV
101: WLGEIKPLSH FKETYMVDMV FYVDEIIQVF NEQFKGSGKP LLYLLHGLNT DSSNFSKPAS FEGIDKFETD LTTLHPILAE CRVIKSSLEL QLIQFANDIS
201: SEAHIEVMRK VTPGMKEYQM ESMFLHHSYM YGGCRHCSYT CICATGDNSA VLHYGHAAAP NDRTFEDGDL ALLDMGAEYH FYGSDITCSF PVNGKFTSDQ
301: SLIYNAVLDA HNSVISAMKP GVNWVDMHKL AEKIILESLK KGSILTGDVD DMMVQRLGAV FMPHGLGHFM GIDTHDTGGY PKGVERPKKP GLKSLRTARD
401: LLEGMVITVE PGCYFIKALL FPAMANATTS KFFNRETIER FRNFGGVRIE SDLVVTANGC KNMTNVPRET WEIEAVMAGG PWPPTK
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)