AT4G29230.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 1.000 ASURE: nucleus What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : NAC domain containing protein 75 | ||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
NAC domain containing protein 75 (NAC075); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: multicellular organismal development, regulation of transcription; EXPRESSED IN: inflorescence meristem, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain containing protein 99 (TAIR:AT5G56620.1); Has 3052 Blast hits to 2928 proteins in 176 species: Archae - 2; Bacteria - 22; Metazoa - 475; Fungi - 52; Plants - 2293; Viruses - 3; Other Eukaryotes - 205 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr4:+:14410338..14414956 | ||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 54875.60 Da | ||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 7.04 | ||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.87 | ||||||||||||||||||||||||||||||||||||
| Length | 498 amino acids | ||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MNKSNPAGSV TGSDIIDAKI EEHQLCGSKK CPSCGHKLEG KPQDWVGLPA GVKFDPTDQE LIEHLEAKVL AKDFKSHPLI DEFIPTIEGE DGICYTHPEK 101: LPGVTRDGLS RHFFHRPSKA YTTGTRKRRK IQTECDNNLQ GSSSSGETRW HKTGKTRPVM VNGKQKGCKK ILVLYTNFGK NRKPEKTNWV MHQYHLGTHE 201: EEKEGELVVS KIFYQTQPRQ CNWSSSTSSL NAIGGGGGEA SSGGGGGEYH MRRDSGTTSG GSCSSSREII NVNPPNRSDE IGGVGGGVMA VAAAAAAVAA 301: GLPSYAMDQL SFVPFMKSFD EVARRETPQT GHATCEDVMA EQHRHRHQPS SSTSHHMAHD HHHHHHQQQQ QRHHAFNISQ PTHPISTIIS PSTSLHHASI 401: NILDDNPYHV HRILLPNENY QTQQQLRQEG EEEHNDGKMG GRSASGLEEL IMGCTSSTTH HDVKDGSSSM GNQQEAEWLK YSTFWPAPDS SDNQDHHG |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)