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AT4G29220.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
cytosol 1.000
ASURE: cytosol
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:31023727 (2019): mitochondrion
  • PMID:25900983 (2015): Golgi
  • PMID:25900983 (2015): Golgi trans-Golgi network
  • PMID:25900983 (2015): Golgi trans-Golgi network early endosome
  • PMID:25900983 (2015): Golgi trans-Golgi network multivesicular body
  • PMID:23396599 (2013): nucleus nuclear envelope nuclear inner membrane
  • PMID:19334764 (2009): plasma membrane
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : phosphofructokinase 1
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
phosphofructokinase 1 (PFK1); FUNCTIONS IN: 6-phosphofructokinase activity; INVOLVED IN: glycolysis; LOCATED IN: cytosol, 6-phosphofructokinase complex, plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Pyrophosphate-dependent phosphofructokinase TP0108 (InterPro:IPR012004), Phosphofructokinase (InterPro:IPR000023); BEST Arabidopsis thaliana protein match is: phosphofructokinase 3 (TAIR:AT4G26270.1); Has 7864 Blast hits to 7397 proteins in 2157 species: Archae - 28; Bacteria - 5161; Metazoa - 680; Fungi - 324; Plants - 394; Viruses - 2; Other Eukaryotes - 1275 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT4G29220-MONOMERBioGrid:14330BRENDA:2.7.1.11DNASU:829043
EC:2.7.1.11eggNOG:COG0205eggNOG:KOG2440EMBL:AL161574
EMBL:AY128388EMBL:BT015793EMBL:CP002687EnsemblPlants:AT4G29220
EnsemblPlants:AT4G29220.1entrez:829043GeneID:829043Genevisible:Q9M0F9
GO:GO:0003872GO:GO:0005524GO:GO:0005829GO:GO:0005886
GO:GO:0006002GO:GO:0006096GO:GO:0046872GO:GO:0061615
Gramene:AT4G29220.1gramene_pathway:2.7.1.11gramene_pathway:GLYCOLYSISgramene_pathway:PWY-1042
HAMAP:MF_01981hmmpanther:PTHR13697hmmpanther:PTHR13697:SF7HOGENOM:HOG000016186
InParanoid:Q9M0F9IntAct:Q9M0F9InterPro:IPR000023InterPro:IPR012004
InterPro:IPR022953iPTMnet:Q9M0F9KEGG:00010+2.7.1.11KEGG:00030+2.7.1.11
KEGG:00051+2.7.1.11KEGG:00052+2.7.1.11KEGG:00680+2.7.1.11KEGG:ath:AT4G29220
KO:K00850OMA:CGMAAVEPaxDb:Q9M0F9Pfam:PF00365
Pfam:Q9M0F9PhylomeDB:Q9M0F9PIR:T13433PIRSF:PIRSF000534
PRIDE:Q9M0F9PRINTS:PR00476PRO:PR:Q9M0F9ProteinModelPortal:Q9M0F9
Proteomes:UP000006548Reactome:R-ATH-70171RefSeq:NP_194651.1SMR:Q9M0F9
STRING:3702.AT4G29220.1SUPFAM:SSF53784TAIR:AT4G29220tair10-symbols:PFK1
UniGene:At.48917UniGene:At.71085UniPathway:UPA00109UniProt:Q9M0F9
Coordinates (TAIR10) chr4:-:14403621..14406071
Molecular Weight (calculated) 51994.30 Da
IEP (calculated) 7.60
GRAVY (calculated) -0.20
Length 473 amino acids
Sequence (TAIR10)
(BLAST)
001: MSSSVPNSDR KIVTGPAGYI LEDVPHFSDD FPDHPTYPNP LQDNAAYSVV KQYFVDEDDT VPQKIVVHPD SPRGTHFRRA GPRQRVYFES DDVLACIVTC
101: GGLCPGLNTV IREIVCGLSY MYGVKRILGI DGGYRGFYAR NTIHLDLKTV NDIHRSGGTI LGTSRGGHNT TKIVDSIQDR GINQVYIIGG DGSQKGAAAI
201: FEEIRKRKLK VAVAGIPKTI DNDIPIIDRS FGFDTAVEEA QRAINAAHVE ATSFENGIGL VKLMGRYSGF IAMHATLASR DVDCCLIPES PFFLEGSGGL
301: FEFIDKRLKE SGHMVIVIAE GAGQDLLSES MKESTTLKDA SGNKLLQDIG LWISQRIKDH FAKKMTLTLK YIDPTYMIRA VPSNASDNVC CTLLAQSAVH
401: GVMAGYNGFT VGLVNGRHTY IPFNRITEKQ NKVVITDRMW ARLLSSTNQP SFMKQADKIH SNQLVGEPGT MKW
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)