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AT4G29210.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
vacuole 1.000
ASURE: vacuole
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:26572690 (2016): extracellular region plant-type cell wall
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : gamma-glutamyl transpeptidase 4
Curator
Summary (TAIR10)
The gene encodes a gamma-glutamyltransferase (AKA gamma-glutamyl transpeptidase, EC 2.3.2.2) that is located in the vacuole and is most active in roots. The encoded enzyme is involved in the initial degradation of glutathione conjugates in this cell compartment. It is also induced by xenobiotics and contributes to xenobiotics metabolism. Note that conflicting nomenclature exists in the literature: At4g29210 is named as GGT3 in Plant J. 2007 Mar 49(5):878-88; At4g29210 is named as GGT4 and At1g69820 as GGT3 in Plant Physiol. 2007 Aug 144(4):1715-32.
Computational
Description (TAIR10)
gamma-glutamyl transpeptidase 4 (GGT4); CONTAINS InterPro DOMAIN/s: Gamma-glutamyltranspeptidase (InterPro:IPR000101); BEST Arabidopsis thaliana protein match is: gamma-glutamyl transpeptidase 1 (TAIR:AT4G39640.2); Has 9173 Blast hits to 9142 proteins in 1473 species: Archae - 86; Bacteria - 4214; Metazoa - 707; Fungi - 305; Plants - 112; Viruses - 1; Other Eukaryotes - 3748 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT4G29210-MONOMERBioCyc:MetaCyc:AT4G29210-MONOMERBRENDA:2.3.2.2BRENDA:3.4.19.13
EC:2.3.2.2EC:3.4.19.13eggNOG:COG0405eggNOG:KOG2410
EMBL:AK228574EMBL:AL161574EMBL:BT005754EMBL:BX828052
EMBL:CP002687EnsemblPlants:AT4G29210EnsemblPlants:AT4G29210.1entrez:829042
GeneID:829042Genevisible:Q9M0G0GO:GO:0003840GO:GO:0005773
GO:GO:0005774GO:GO:0006751GO:GO:0006805GO:GO:0009636
GO:GO:0016021GO:GO:0016756GO:GO:0036374gramene_pathway:2.3.2.2
gramene_pathway:PWY-4041gramene_pathway:PWYQT-4432hmmpanther:PTHR11686hmmpanther:PTHR11686:SF29
HOGENOM:HOG000175620InParanoid:Q9M0G0InterPro:IPR000101InterPro:IPR029055
KEGG:00430+2.3.2.2KEGG:00460+2.3.2.2KEGG:00480+2.3.2.2+3.4.19.13KEGG:ath:AT4G29210
KO:K18592MEROPS:T03.A01ncoils:CoilOMA:EMIIEIG
PANTHER:PTHR11686PaxDb:Q9M0G0Pfam:PF01019Pfam:Q9M0G0
PhylomeDB:Q9M0G0PIR:T13432PRIDE:Q9M0G0PRINTS:PR01210
PRO:PR:Q9M0G0ProteinModelPortal:Q9M0G0Proteomes:UP000006548Reactome:R-ATH-174403
Reactome:R-ATH-2142691Reactome:R-ATH-5423646RefSeq:NP_194650.1RefSeq:NP_974636.1
SMR:Q9M0G0STRING:3702.AT4G29210.1SUPFAM:SSF56235TAIR:AT4G29210
tair10-symbols:GGT3tair10-symbols:GGT4TIGRfam:TIGR00066TIGRFAMs:TIGR00066
TMHMM:TMhelixUniGene:At.48917UniGene:At.71085UniPathway:UPA00204
UniProt:Q9M0G0
Coordinates (TAIR10) chr4:+:14400990..14403319
Molecular Weight (calculated) 69152.40 Da
IEP (calculated) 6.12
GRAVY (calculated) -0.09
Length 637 amino acids
Sequence (TAIR10)
(BLAST)
001: MRDAIIADPL LAIDHETVAE KKKQSKNLKI SLLLLLILLA TSGYYSFSDN ITTVFLSRQA IDDDHSLSLG TISDVVESEN GVVAADDARC SEIGASVLRS
101: GGHAVDAAVA ITLCVGVVNP MSSGIGGGSF LIVSSQKDSK AEAFDMRETA PLAASKDMYK NDASAKSLGA LSMGVPGEIA GLYEAWKRYG RLPWKPLFEP
201: AIKLARDGFV VYPYLGKAIS TKVAMILKDP GMRSVFSRNG QVLKTGETCY NPELAQSLET ISEQGPGAFY NGTVGEKLVK DVKKAGGIIT MDDLRSYKVR
301: VTDAMSVDVM GYTVHGMPPP SGGTVGFSMV MNILDSYSNL YTASGRELGL HRLIEAMKHM FAARMDLGDP EFVNVTNSMN QMLSKAHAEE IQKRIFDNTT
401: FPPEYYMNRW SQLRDQGTSH FCVVDADRNS VSMTSTVNYR FGAGVLSPST GIVLNNEMDD FSTPTEITPD MLPPAPTNFI EPNKRPLSSM TPLVITKDGE
501: FVAALGGAGG MHIIPAVLQV FLNCFVLNMK PKEAVESARI YHRLIPNVVS YENFTTINGD HIGVSEDTKM FLAERGHELK ELSGGAIVQL IVQSFKEEKE
601: EEMIIEIGRK IGKKSKPLKG LLTAVSDPRK DGKPAAV
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)