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AT4G29070.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
peroxisome 0.974
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Phospholipase A2 family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Phospholipase A2 family protein; CONTAINS InterPro DOMAIN/s: Phospholipase A2 (InterPro:IPR016090); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410IWJHeggNOG:ENOG41120TKEMBL:BT024490EMBL:CP002687
EnsemblPlants:AT4G29070EnsemblPlants:AT4G29070.1EnsemblPlants:AT4G29070.2entrez:829028
GeneID:829028Gramene:AT4G29070.1Gramene:AT4G29070.2hmmpanther:PTHR37246
hmmpanther:PTHR37246:SF1HOGENOM:HOG000006059InterPro:IPR016090KEGG:00564+3.1.1.4
KEGG:00565+3.1.1.4KEGG:00590+3.1.1.4KEGG:00591+3.1.1.4KEGG:00592+3.1.1.4
KEGG:ath:AT4G29070OMA:MCITGLKPhylomeDB:Q2HIU1Proteomes:UP000006548
RefSeq:NP_001031744.1RefSeq:NP_567821.1SMR:Q2HIU1STRING:3702.AT4G29070.1
SUPFAM:SSF48619TAIR:AT4G29070UniGene:At.31962UniProt:Q2HIU1
Coordinates (TAIR10) chr4:+:14322109..14323035
Molecular Weight (calculated) 29654.30 Da
IEP (calculated) 9.72
GRAVY (calculated) -0.45
Length 259 amino acids
Sequence (TAIR10)
(BLAST)
001: MNFGLPSISW FGSISTKKDV AMIDSVTPTT TSLLEQPEQE KATTFLLKQP EKEKGLFDIK IWTWSSFSSV LPWSANASDG KQKPTTINRG LKRHALSRRS
101: SRSNGVNTVY RFRPYVSKVP WHTGTRAFLS QLFPRYGHYC GPNWSSGKDG GSMVWDQRPI DWLDHCCYCH DIGYDTHDQA ELLKADMAFL ECLESNKRVV
201: TRGDAQVAHF YKTMCITGLK SILIPYRSYL VKIQYGQNLL DFGWIVSNLS KRSWSFQKN
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)