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AT4G29010.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
peroxisome 1.000
ASURE: peroxisome
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:27943495 (2017): mitochondrion
  • PMID:25900983 (2015): Golgi
  • PMID:25900983 (2015): plant-type vacuole plant-type vacuole membrane
  • PMID:25900983 (2015): Golgi trans-Golgi network multivesicular body
  • PMID:25900983 (2015): Golgi trans-Golgi network early endosome
  • PMID:25900983 (2015): Golgi trans-Golgi network
  • PMID:25900983 (2015): Golgi Golgi apparatus Golgi membrane
  • PMID:24130194 (2013): peroxisome
  • PMID:23396599 (2013): nucleus nuclear envelope nuclear inner membrane
  • PMID:21433285 (2011): plasma membrane
  • PMID:19334764 (2009): plasma membrane
  • PMID:19329564 (2009): peroxisome
  • PMID:18931141 (2008): peroxisome
  • PMID:17951448 (2007): peroxisome
  • PMID:15028209 (2004): plastid
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Enoyl-CoA hydratase/isomerase family
Curator
Summary (TAIR10)
Functions in beta-oxidation of fatty acids, similar to CuMFP with L-3-hydroxyacyl-CoA hydrolyase , L-3-hydroxyacyl-dehydrogenase, D-3-hydroxyacyl-CoA epimerase, and 3, 2-enoyl-CoA isomerase activities
Computational
Description (TAIR10)
ABNORMAL INFLORESCENCE MERISTEM (AIM1); FUNCTIONS IN: enoyl-CoA hydratase activity; INVOLVED IN: multicellular organismal development, flower development, fatty acid beta-oxidation, seed germination; LOCATED IN: cell wall, peroxisome, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Enoyl-CoA hydratase/isomerase, conserved site (InterPro:IPR018376), 3-hydroxyacyl-CoA dehydrogenase, conserved site (InterPro:IPR006180), 6-phosphogluconate dehydrogenase, C-terminal-like (InterPro:IPR008927), Dehydrogenase, multihelical (InterPro:IPR013328), NAD(P)-binding domain (InterPro:IPR016040), 3-hydroxyacyl-CoA dehydrogenase, NAD binding (InterPro:IPR006176), Crotonase, core (InterPro:IPR001753), 3-hydroxyacyl-CoA dehydrogenase, C-terminal (InterPro:IPR006108); BEST Arabidopsis thaliana protein match is: multifunctional protein 2 (TAIR:AT3G06860.1); Has 47636 Blast hits to 46241 proteins in 2477 species: Archae - 813; Bacteria - 30277; Metazoa - 2018; Fungi - 1063; Plants - 649; Viruses - 0; Other Eukaryotes - 12816 (source: NCBI BLink).
Protein Annotations
BioCyc:MetaCyc:AT4G29010-MONOMERBioGrid:14309EC:1.1.1.35EC:4.2.1.17EC:5.1.2.3EC:5.3.3.8eggNOG:COG1024
eggNOG:COG1250eggNOG:KOG1683EMBL:AF123253EMBL:AL078470EMBL:AL161574EMBL:AY059815EMBL:AY072072
EMBL:AY096659EMBL:CP002687EnsemblPlants:AT4G29010EnsemblPlants:AT4G29010.1entrez:829022Gene3D:1.10.1040.10Gene3D:3.40.50.720
Gene3D:3.90.226.10GeneID:829022Genevisible:Q9ZPI6GO:GO:0003857GO:GO:0004165GO:GO:0004300GO:GO:0005618
GO:GO:0005777GO:GO:0006635GO:GO:0008692GO:GO:0009506GO:GO:0009507GO:GO:0009695GO:GO:0009908
Gramene:AT4G29010.1gramene_pathway:1.1.1.35gramene_pathway:4.2.1.116gramene_pathway:4.2.1.17gramene_pathway:4.2.1.55gramene_pathway:ILEUDEG-PWYgramene_pathway:LYSINE-DEG2-PWY
gramene_pathway:PWY-3941gramene_pathway:PWY-5136gramene_pathway:PWY-5138gramene_pathway:PWY-735gramene_pathway:VALDEG-PWYgramene_plant_reactome:1119445gramene_plant_reactome:6876400
hmmpanther:PTHR23309hmmpanther:PTHR23309:SF10HOGENOM:HOG000261347InParanoid:Q9ZPI6InterPro:IPR001753InterPro:IPR006108InterPro:IPR006176
InterPro:IPR006180InterPro:IPR008927InterPro:IPR013328InterPro:IPR016040InterPro:IPR018376InterPro:IPR029045InterPro:IPR033346
iPTMnet:Q9ZPI6KEGG:00062+4.2.1.17+1.1.1.35KEGG:00071+4.2.1.17+1.1.1.35KEGG:00071+5.1.2.3+4.2.1.17+1.1.1.35KEGG:00120+1.1.1.35KEGG:00280+4.2.1.17+1.1.1.35KEGG:00281+4.2.1.17+1.1.1.35
KEGG:00310+4.2.1.17+1.1.1.35KEGG:00360+4.2.1.17KEGG:00362+4.2.1.17+1.1.1.35KEGG:00380+4.2.1.17+1.1.1.35KEGG:00410+4.2.1.17KEGG:00592+4.2.1.17KEGG:00623+1.1.1.35
KEGG:00627+4.2.1.17KEGG:00640+4.2.1.17KEGG:00650+4.2.1.17+1.1.1.35KEGG:00650+5.1.2.3+4.2.1.17+1.1.1.35KEGG:00720+4.2.1.17+1.1.1.35KEGG:00903+4.2.1.17KEGG:00930+4.2.1.17+1.1.1.35
KEGG:ath:AT4G29010KO:K10527OMA:FKDVDMAPANTHER:PTHR23309:SF10PaxDb:Q9ZPI6Pfam:PF00378Pfam:PF00725
Pfam:PF02737Pfam:Q9ZPI6PhylomeDB:Q9ZPI6PIR:T08956PRIDE:Q9ZPI6PRO:PR:Q9ZPI6PROSITE:PS00067
PROSITE:PS00166ProteinModelPortal:Q9ZPI6Proteomes:UP000006548RefSeq:NP_194630.1scanprosite:PS00067scanprosite:PS00166SMR:Q9ZPI6
STRING:3702.AT4G29010.1SUPFAM:SSF48179SUPFAM:SSF51735SUPFAM:SSF52096SwissLipids:SLP:000000866TAIR:AT4G29010tair10-symbols:AIM1
UniGene:At.3404UniGene:At.48915UniPathway:UPA00659UniProt:Q9ZPI6
Coordinates (TAIR10) chr4:-:14297312..14302016
Molecular Weight (calculated) 77862.80 Da
IEP (calculated) 9.89
GRAVY (calculated) 0.09
Length 721 amino acids
Sequence (TAIR10)
(BLAST)
001: MAKKIGVTME VGNDGVAVIT ISNPPVNSLA SPIISGLKEK FRDANQRNDV KAIVLIGNNG RFSGGFDINV FQQVHKTGDL SLMPEVSVEL VCNLMEDSRK
101: PVVAAVEGLA LGGGLELAMA CHARVAAPKA QLGLPELTLG VIPGFGGTQR LPRLVGLAKA TDMILLSKSI SSEEGHKLGL IDALVPPGDV LSTSRKWALD
201: IAEGRKPFLQ SLHRTDKIGS LSEARAILKN SRQLAKKIAP NMPQHHACIE VIEEGIIHGG YSGVLKEAEV FKQLVLSDTA KGLVHVFFAQ RATSKVPNVT
301: DVGLKPRPIK KVAVIGGGLM GSGIATALLL SNIRVVLKEI NSEFLMKGIK SVEANMKSLV SRGKLTQDKA GKALSLFKGV LDYTEFNDVD MVIEAVIENI
401: QLKQNIFKEI EKVCSPHCIL ASNTSTIDLD VIGEKTNSKD RIVGAHFFSP AHLMPLLEIV RSKNTSAQVI LDLMAVGKAI KKVPVVVGNC IGFAVNRTFF
501: PYSQAAHMLA NLGVDLFRID SVITSFGLPL GPFQLGDLAG HGIGLAVGPI YAKVYGDRMF RSPMTELLLK SGRNGKINGR GYYIYEKGSK PKPDPSVLSI
601: VEKSRKLTNI MPGGKPISVT DKEIVEMILF PVVNEACRVL DEGVVIRASD LDIASVLGMS FPSYRGGIVF WADTVGPKYI YERLKKLSET YGSFFKPSRY
701: LEERAMNGML LSESKSSRSK L
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)