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AT4G28650.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
plasma membrane 0.999
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Leucine-rich repeat transmembrane protein kinase family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Leucine-rich repeat transmembrane protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: hypocotyl, root, guard cell; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich receptor-like protein kinase family protein (TAIR:AT1G08590.1); Has 236312 Blast hits to 142770 proteins in 4269 species: Archae - 150; Bacteria - 21752; Metazoa - 75925; Fungi - 11533; Plants - 97988; Viruses - 432; Other Eukaryotes - 28532 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT4G28650-MONOMERBioGrid:14270EC:2.7.11.1eggNOG:COG0515eggNOG:COG4886eggNOG:ENOG410IJBEEMBL:AL161573
EMBL:CP002687EMBL:FJ708756EnsemblPlants:AT4G28650EnsemblPlants:AT4G28650.1entrez:828983Gene3D:3.80.10.10GeneID:828983
Genevisible:Q9M0G7GO:GO:0001944GO:GO:0004672GO:GO:0004674GO:GO:0005524GO:GO:0005886GO:GO:0006468
GO:GO:0010067GO:GO:0016021GO:GO:0030154GO:GO:0046777GO:GO:0090406Gramene:AT4G28650.1hmmpanther:PTHR27000
hmmpanther:PTHR27000:SF42HOGENOM:HOG000116551InParanoid:Q9M0G7InterPro:IPR000719InterPro:IPR001611InterPro:IPR003591InterPro:IPR008271
InterPro:IPR011009InterPro:IPR013210InterPro:IPR017441InterPro:IPR032675iPTMnet:Q9M0G7KEGG:ath:AT4G28650OMA:KGEWPWR
PaxDb:Q9M0G7Pfam:PF00069Pfam:PF00560Pfam:PF08263Pfam:PF13516Pfam:PF13855Pfam:Q9M0G7
Pfscan:PS50011PhylomeDB:Q9M0G7PIR:T10659PRIDE:Q9M0G7PRO:PR:Q9M0G7PROSITE:PS00107PROSITE:PS00108
PROSITE:PS50011ProteinModelPortal:Q9M0G7Proteomes:UP000006548RefSeq:NP_194594.1scanprosite:PS00107scanprosite:PS00108SMART:SM00220
SMART:SM00369SMR:Q9M0G7STRING:3702.AT4G28650.1SUPFAM:SSF52047SUPFAM:SSF52058SUPFAM:SSF56112TAIR:AT4G28650
UniGene:At.4527UniProt:Q9M0G7
Coordinates (TAIR10) chr4:-:14144155..14147276
Molecular Weight (calculated) 110484.00 Da
IEP (calculated) 6.99
GRAVY (calculated) 0.00
Length 1013 amino acids
Sequence (TAIR10)
(BLAST)
0001: MKMKIIVLFL YYCYIGSTSS VLASIDNVNE LSVLLSVKST LVDPLNFLKD WKLSDTSDHC NWTGVRCNSN GNVEKLDLAG MNLTGKISDS ISQLSSLVSF
0101: NISCNGFESL LPKSIPPLKS IDISQNSFSG SLFLFSNESL GLVHLNASGN NLSGNLTEDL GNLVSLEVLD LRGNFFQGSL PSSFKNLQKL RFLGLSGNNL
0201: TGELPSVLGQ LPSLETAILG YNEFKGPIPP EFGNINSLKY LDLAIGKLSG EIPSELGKLK SLETLLLYEN NFTGTIPREI GSITTLKVLD FSDNALTGEI
0301: PMEITKLKNL QLLNLMRNKL SGSIPPAISS LAQLQVLELW NNTLSGELPS DLGKNSPLQW LDVSSNSFSG EIPSTLCNKG NLTKLILFNN TFTGQIPATL
0401: STCQSLVRVR MQNNLLNGSI PIGFGKLEKL QRLELAGNRL SGGIPGDISD SVSLSFIDFS RNQIRSSLPS TILSIHNLQA FLVADNFISG EVPDQFQDCP
0501: SLSNLDLSSN TLTGTIPSSI ASCEKLVSLN LRNNNLTGEI PRQITTMSAL AVLDLSNNSL TGVLPESIGT SPALELLNVS YNKLTGPVPI NGFLKTINPD
0601: DLRGNSGLCG GVLPPCSKFQ RATSSHSSLH GKRIVAGWLI GIASVLALGI LTIVTRTLYK KWYSNGFCGD ETASKGEWPW RLMAFHRLGF TASDILACIK
0701: ESNMIGMGAT GIVYKAEMSR SSTVLAVKKL WRSAADIEDG TTGDFVGEVN LLGKLRHRNI VRLLGFLYND KNMMIVYEFM LNGNLGDAIH GKNAAGRLLV
0801: DWVSRYNIAL GVAHGLAYLH HDCHPPVIHR DIKSNNILLD ANLDARIADF GLARMMARKK ETVSMVAGSY GYIAPEYGYT LKVDEKIDIY SYGVVLLELL
0901: TGRRPLEPEF GESVDIVEWV RRKIRDNISL EEALDPNVGN CRYVQEEMLL VLQIALLCTT KLPKDRPSMR DVISMLGEAK PRRKSNSNEE NTSRSLAEKH
1001: SSVFSTSPVN GLL
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)