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AT4G28500.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
nucleus 1.000
ASURE: nucleus
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : NAC domain containing protein 73
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
NAC domain containing protein 73 (NAC073); CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain containing protein 10 (TAIR:AT1G28470.1); Has 2322 Blast hits to 2317 proteins in 68 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2321; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410IGX8eggNOG:ENOG410YF7QEMBL:AL021749EMBL:AL161572
EMBL:CP002687EMBL:DQ056658EnsemblPlants:AT4G28500EnsemblPlants:AT4G28500.1
entrez:828968GeneID:828968Genevisible:O49459GO:GO:0003700
GO:GO:0005634GO:GO:0006351GO:GO:0044212GO:GO:0045893
GO:GO:2000652Gramene:AT4G28500.1hmmpanther:PTHR31079hmmpanther:PTHR31079:SF6
HOGENOM:HOG000238154InterPro:IPR003441KEGG:ath:AT4G28500OMA:CINIDSL
PaxDb:O49459Pfam:O49459Pfam:PF02365Pfscan:PS51005
PhylomeDB:O49459PIR:T04621PRIDE:O49459PRO:PR:O49459
PROSITE:PS51005ProteinModelPortal:O49459Proteomes:UP000006548RefSeq:NP_194579.1
SMR:O49459STRING:3702.AT4G28500.1SUPFAM:SSF101941TAIR:AT4G28500
tair10-symbols:ANAC073tair10-symbols:NAC073tair10-symbols:SND2UniGene:At.54535
UniProt:O49459
Coordinates (TAIR10) chr4:+:14083014..14084266
Molecular Weight (calculated) 33698.70 Da
IEP (calculated) 9.27
GRAVY (calculated) -0.75
Length 305 amino acids
Sequence (TAIR10)
(BLAST)
001: MTWCNDRSDV QTVERIIPSP GAAESPVASL PVSCHKTCPS CGHNFKFHEQ AGIHDLPGLP AGVKFDPTDQ EVLEHLEGKV RDDAKKLHPL IDEFIRTIDG
101: ENGICYTHPE KLPGVNKDGT VRHFFHRPSK AYTTGTRKRR KVHTDSDVGG ETRWHKTGKT RPVLAGGRVR GYKKILVLYT NYGKQKKPEK TNWVMHQYHL
201: GTSEEEKEGE LVVSKVFYQT QPRQCGGSVA AAATAKDRPY LHGLGGGGGR HLHYHLHHNN GNGKSNGSGG TAGAGEYYHN IPAIISFNQT GIQNHLVHDS
301: QPFIP
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)