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AT4G28490.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
plasma membrane 0.988
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Leucine-rich receptor-like protein kinase family protein
Curator
Summary (TAIR10)
member of Receptor kinase-like protein family
Computational
Description (TAIR10)
HAESA (HAE); CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: HAESA-like 1 (TAIR:AT1G28440.1); Has 220102 Blast hits to 139812 proteins in 4767 species: Archae - 153; Bacteria - 21531; Metazoa - 69757; Fungi - 11264; Plants - 91233; Viruses - 407; Other Eukaryotes - 25757 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT4G28490-MONOMERBioGrid:14254BRENDA:2.7.10.2EC:2.7.10.1EC:2.7.11.1eggNOG:COG4886eggNOG:ENOG410JTIH
EMBL:AL021749EMBL:AL161572EMBL:CP002687EMBL:FJ708755EMBL:M84660EnsemblPlants:AT4G28490EnsemblPlants:AT4G28490.1
entrez:828967Gene3D:3.80.10.10GeneID:828967Genevisible:P47735GO:GO:0004672GO:GO:0004674GO:GO:0004714
GO:GO:0005524GO:GO:0005886GO:GO:0010102GO:GO:0010227GO:GO:0010468GO:GO:0016021GO:GO:0045490
GO:GO:0046777Gramene:AT4G28490.1hmmpanther:PTHR27000hmmpanther:PTHR27000:SF215HOGENOM:HOG000116551InParanoid:P47735IntAct:P47735
InterPro:IPR000719InterPro:IPR001611InterPro:IPR003591InterPro:IPR008271InterPro:IPR011009InterPro:IPR013210InterPro:IPR017441
InterPro:IPR032675KEGG:ath:AT4G28490KO:K08286OMA:RLWCCCSPaxDb:P47735Pfam:P47735Pfam:PF00069
Pfam:PF08263Pfam:PF13855Pfscan:PS50011Pfscan:PS51450PhylomeDB:P47735PIR:S27756PRIDE:P47735
PRO:PR:P47735PROSITE:PS00107PROSITE:PS00108PROSITE:PS50011PROSITE:PS51450ProteinModelPortal:P47735Proteomes:UP000006548
RefSeq:NP_194578.1scanprosite:PS00107scanprosite:PS00108SMART:SM00220SMART:SM00369SMR:P47735STRING:3702.AT4G28490.1
SUPFAM:SSF52047SUPFAM:SSF52058SUPFAM:SSF56112TAIR:AT4G28490tair10-symbols:HAEtair10-symbols:RLK5TMHMM:TMhelix
UniGene:At.19985UniProt:P47735
Coordinates (TAIR10) chr4:+:14077894..14080965
Molecular Weight (calculated) 109102.00 Da
IEP (calculated) 6.80
GRAVY (calculated) -0.02
Length 999 amino acids
Sequence (TAIR10)
(BLAST)
001: MLYCLILLLC LSSTYLPSLS LNQDATILRQ AKLGLSDPAQ SLSSWSDNND VTPCKWLGVS CDATSNVVSV DLSSFMLVGP FPSILCHLPS LHSLSLYNNS
101: INGSLSADDF DTCHNLISLD LSENLLVGSI PKSLPFNLPN LKFLEISGNN LSDTIPSSFG EFRKLESLNL AGNFLSGTIP ASLGNVTTLK ELKLAYNLFS
201: PSQIPSQLGN LTELQVLWLA GCNLVGPIPP SLSRLTSLVN LDLTFNQLTG SIPSWITQLK TVEQIELFNN SFSGELPESM GNMTTLKRFD ASMNKLTGKI
301: PDNLNLLNLE SLNLFENMLE GPLPESITRS KTLSELKLFN NRLTGVLPSQ LGANSPLQYV DLSYNRFSGE IPANVCGEGK LEYLILIDNS FSGEISNNLG
401: KCKSLTRVRL SNNKLSGQIP HGFWGLPRLS LLELSDNSFT GSIPKTIIGA KNLSNLRISK NRFSGSIPNE IGSLNGIIEI SGAENDFSGE IPESLVKLKQ
501: LSRLDLSKNQ LSGEIPRELR GWKNLNELNL ANNHLSGEIP KEVGILPVLN YLDLSSNQFS GEIPLELQNL KLNVLNLSYN HLSGKIPPLY ANKIYAHDFI
601: GNPGLCVDLD GLCRKITRSK NIGYVWILLT IFLLAGLVFV VGIVMFIAKC RKLRALKSST LAASKWRSFH KLHFSEHEIA DCLDEKNVIG FGSSGKVYKV
701: ELRGGEVVAV KKLNKSVKGG DDEYSSDSLN RDVFAAEVET LGTIRHKSIV RLWCCCSSGD CKLLVYEYMP NGSLADVLHG DRKGGVVLGW PERLRIALDA
801: AEGLSYLHHD CVPPIVHRDV KSSNILLDSD YGAKVADFGI AKVGQMSGSK TPEAMSGIAG SCGYIAPEYV YTLRVNEKSD IYSFGVVLLE LVTGKQPTDS
901: ELGDKDMAKW VCTALDKCGL EPVIDPKLDL KFKEEISKVI HIGLLCTSPL PLNRPSMRKV VIMLQEVSGA VPCSSPNTSK RSKTGGKLSP YYTEDLNSV
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)