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AT4G28240.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
mitochondrion 0.981
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Wound-responsive family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Wound-responsive family protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function wound-induced (InterPro:IPR022251); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Protein Annotations
DNASU:828939eggNOG:ENOG410J52MeggNOG:ENOG410ZGXPEMBL:AY050439EMBL:AY085958EMBL:AY136304EMBL:CP002687
EnsemblPlants:AT4G28240EnsemblPlants:AT4G28240.1entrez:828939GeneID:828939Gramene:AT4G28240.1hmmpanther:PTHR33090hmmpanther:PTHR33090:SF1
HOGENOM:HOG000238802InterPro:IPR022251KEGG:ath:AT4G28240OMA:CEERRNQPfam:PF12609PhylomeDB:Q94A22Proteomes:UP000006548
RefSeq:NP_567802.1STRING:3702.AT4G28240.1TAIR:AT4G28240UniGene:At.4519UniGene:At.69904UniProt:Q94A22
Coordinates (TAIR10) chr4:-:13997979..13998239
Molecular Weight (calculated) 9493.24 Da
IEP (calculated) 9.88
GRAVY (calculated) -0.47
Length 86 amino acids
Sequence (TAIR10)
(BLAST)
1: MSYLNKVWMA ASFVAVQGNA DHGVKLKSGL TSAHRLQRRL SSDLRPLAAA DLTGDSLPSE ERRRTSSSTP DESLRQVMYL NCWAQG
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)