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AT4G28190.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
nucleus 0.993
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Developmental regulator, ULTRAPETALA
Curator
Summary (TAIR10)
Encodes a novel Cys-rich protein with a B-box like domain that acts as a negative regulator of meristem cell accumulation in inflorescence and floral meristems as loss-of-function ult1 mutations cause inflorescence meristem enlargement, the production of extra flowers and floral organs, and a decrease in floral meristem determinacy. Acts opposite to CLF which represses AG, but preventing deposition of CLF repressive methylation marks.
Computational
Description (TAIR10)
ULTRAPETALA1 (ULT1); FUNCTIONS IN: DNA binding; INVOLVED IN: regulation of floral meristem growth, meristem determinacy, regulation of inflorescence meristem growth, floral meristem determinacy; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 29 plant structures; EXPRESSED DURING: 19 growth stages; CONTAINS InterPro DOMAIN/s: Developmental regulator, ULTRAPETALA (InterPro:IPR020533), SAND domain (InterPro:IPR000770); BEST Arabidopsis thaliana protein match is: Developmental regulator, ULTRAPETALA (TAIR:AT2G20825.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Protein Annotations
BioGrid:14221EMBL:AK117106EMBL:AL161572EMBL:AY088835EMBL:CP002687EnsemblPlants:AT4G28190EnsemblPlants:AT4G28190.1
entrez:828934ExpressionAtlas:Q8GZA8GeneID:828934Genevisible:Q8GZA8GO:GO:0003677GO:GO:0005634GO:GO:0005737
GO:GO:0006351GO:GO:0006355GO:GO:0007275hmmpanther:PTHR34053hmmpanther:PTHR34053:SF1HOGENOM:HOG000272671InParanoid:Q8GZA8
InterPro:IPR000770InterPro:IPR020533Pfam:PF01342Pfam:Q8GZA8Pfscan:PS50864PhylomeDB:Q8GZA8PIR:T09035
PRIDE:Q8GZA8PRO:PR:Q8GZA8ProDom:PD317854PROSITE:PS50864ProteinModelPortal:Q8GZA8Proteomes:UP000006548RefSeq:NP_567799.1
TAIR:AT4G28190tair10-symbols:ULTtair10-symbols:ULT1UniGene:At.32037UniProt:Q0V807UniProt:Q8GZA8
Coordinates (TAIR10) chr4:+:13985753..13987050
Molecular Weight (calculated) 26745.60 Da
IEP (calculated) 7.36
GRAVY (calculated) -0.68
Length 237 amino acids
Sequence (TAIR10)
(BLAST)
001: MANNEGEMQC GSMLFKQEEL QEMSGVNVGG DYVEVMCGCT SHRYGDAVAR LRVFPTGDLE ITCECTPGCD EDKLTPAAFE KHSGRETARK WKNNVWVIIG
101: GEKVPLSKTV LLKYYNESSK KCSRSNRSQG AKVCHRDEFV GCNDCGKERR FRLRSRDECR LHHNAMGDPN WKCSDFPYDK ITCEEEEERG SRKVYRGCTR
201: SPSCKGCTSC VCFGCELCRF SECTCQTCVD FTSNVKA
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)