suba logo
AT4G28030.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

.
SUBAcon:
plastid 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Acyl-CoA N-acyltransferases (NAT) superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Acyl-CoA N-acyltransferases (NAT) superfamily protein; FUNCTIONS IN: N-acetyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GCN5-related N-acetyltransferase, C-terminal (InterPro:IPR022610), GCN5-related N-acetyltransferase (InterPro:IPR000182), Acyl-CoA N-acyltransferase (InterPro:IPR016181); BEST Arabidopsis thaliana protein match is: Acyl-CoA N-acyltransferases (NAT) superfamily protein (TAIR:AT2G06025.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410IHPTeggNOG:ENOG41124NQEMBL:AY048278EMBL:AY133564
EMBL:CP002687EnsemblPlants:AT4G28030EnsemblPlants:AT4G28030.1entrez:828918
ExpressionAtlas:Q94AC8Gene3D:3.40.630.30GeneID:828918GO:GO:0008080
GO:GO:0009507Gramene:AT4G28030.1hmmpanther:PTHR23091hmmpanther:PTHR23091:SF234
InterPro:IPR000182InterPro:IPR016181OMA:CLRVRTFPfam:PF00583
Pfscan:PS51186PhylomeDB:Q94AC8PROSITE:PS51186Proteomes:UP000006548
RefSeq:NP_567795.1SMR:Q94AC8STRING:3702.AT4G28030.1SUPFAM:SSF55729
TAIR:AT4G28030UniGene:At.24081UniGene:At.75214UniProt:Q94AC8
Coordinates (TAIR10) chr4:-:13937748..13939131
Molecular Weight (calculated) 30418.20 Da
IEP (calculated) 6.51
GRAVY (calculated) -0.19
Length 274 amino acids
Sequence (TAIR10)
(BLAST)
001: MAFLCSSLPS SSSIAIFGDP NTDGSSRSYL SIPSLKLRFR PVAASSHICA PAIDKSTFVI SESVSEDELW AAACLRVRTF NELNPSAYNI QDHRRYLAER
101: EFEALKERTS GKREGFTRVA CINATLPLSQ LSSSFEDLCS ACKFSDGIED RVVVGSLDLN QCRWLPDEIA GTKPEGIGVD FARAYLSNVC VAKELHRNGV
201: GYKLIDKSKR VAGEWGITDM YVHVTVDNEA AKSLYMKSGF EQETAEPAWQ ARYLNRPQRL LLWLALPTSP IMSM
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)