suba logo
AT4G27820.1
Subcellular Consensus
(Prediction and Experimental)

min: heatmap :max

.
SUBAcon:
extracellular 0.790
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : beta glucosidase 9
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
beta glucosidase 9 (BGLU9); FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: peroxisome; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 1 (InterPro:IPR001360), Glycoside hydrolase, family 1, active site (InterPro:IPR018120), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: beta glucosidase 10 (TAIR:AT4G27830.1); Has 11131 Blast hits to 10798 proteins in 1457 species: Archae - 142; Bacteria - 7630; Metazoa - 718; Fungi - 199; Plants - 1452; Viruses - 0; Other Eukaryotes - 990 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT4G27820-MONOMERCAZy:GH1EC:3.2.1.21eggNOG:COG2723eggNOG:KOG0626EMBL:AK229513EMBL:AL078579
EMBL:AL161571EMBL:CP002687EnsemblPlants:AT4G27820EnsemblPlants:AT4G27820.1entrez:828895Gene3D:3.20.20.80GeneID:828895
Genevisible:Q9STP4GO:GO:0005777GO:GO:0005975GO:GO:0008422Gramene:AT4G27820.1gramene_pathway:3.5.2.17gramene_pathway:PWY-5691
hmmpanther:PTHR10353hmmpanther:PTHR10353:SF29HOGENOM:HOG000088630InParanoid:Q9STP4InterPro:IPR001360InterPro:IPR013781InterPro:IPR017853
InterPro:IPR033132KEGG:ath:AT4G27820OMA:WTTMDEAPANTHER:PTHR10353PaxDb:Q9STP4Pfam:PF00232Pfam:Q9STP4
PhylomeDB:Q9STP4PIR:T09021PRIDE:Q9STP4PRINTS:PR00131PRO:PR:Q9STP4PROSITE:PS00653ProteinModelPortal:Q9STP4
Proteomes:UP000006548RefSeq:NP_194511.3scanprosite:PS00653SMR:Q9STP4STRING:3702.AT4G27820.1SUPFAM:SSF51445TAIR:AT4G27820
tair10-symbols:BGLU9TMHMM:TMhelixUniGene:At.32068UniProt:Q9STP4
Coordinates (TAIR10) chr4:-:13857873..13860571
Molecular Weight (calculated) 56895.00 Da
IEP (calculated) 5.45
GRAVY (calculated) -0.24
Length 506 amino acids
Sequence (TAIR10)
(BLAST)
001: MKHFSLLFIF LVILLATSYS DAFTRNSFPK DFLFGAATSA YQWEGAVAED GRTPSVWDTF SNSYDTGNGD VTSDGYHKYK EDVKLMATMG LESFRFSISW
101: SRLIPNGRGL INPKGLLFYN NLIKDLKSHG IEPHVTLYHY DLPQSLEDEY GGWINRKIIE DFTAYADVCF REFGEDVKLW TTINEATIFA IGSYDQGTAP
201: PGHCSPNKFV NCSTGNSSTE PYIAGHNILL AHASASKLYK LKYKSKQKGS IGLSIFAFGL SPYTNSKDDE IATQRAKTFL YGWMLKPLVF GDYPDEMKKT
301: VGSRLPVFSE EESEQVKGSS DFIGIIHYTT FYVTNHQPSA SLFPSMGEGF FKDMGVYIIP TGNSSFLVWE ATPWGLEGIL EYIKQSYNNP PVYILENGMP
401: MVRDSTLQDT QRIEYIQAYI DAVLNAMKNG SDTRGYFVWS MVDVYEILSG YTTSFGMYHV NFSDPGRKRT PKLSASWYTG FLNGTIDVAS QDTIQLWSNF
501: SVSSSL
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)