AT4G27710.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 0.517 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : cytochrome P450, family 709, subfamily B, polypeptide 3 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
member of CYP709B | ||||||||||||||||||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
cytochrome P450, family 709, subfamily B, polypeptide 3 (CYP709B3); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 709, subfamily B, polypeptide 2 (TAIR:AT2G46950.1); Has 30071 Blast hits to 29967 proteins in 1579 species: Archae - 57; Bacteria - 3774; Metazoa - 11258; Fungi - 5668; Plants - 8080; Viruses - 3; Other Eukaryotes - 1231 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr4:+:13828520..13830417 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 59772.60 Da | ||||||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 9.66 | ||||||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.17 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Length | 518 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MELISTINLL TIVLLLFVVS KIWKACWILL LRPLMLSKRF KKQGISGPKY KILYGNLSEI KKMKKEADLC VLDPNSNDIF PRVFPQYHQW MSQYGDTFLF 101: WTGTKPTIYI SNHELAKQVL SSKFGFTIIP VKRPEVFILF GKGLSFIQGD DWIRHRRILN PAFSMDRLKA MTQPMGDCTL RIFEEWRKQR RNGEVLIKIE 201: ISKEFHKLTA DIIATTAFGS SYAEGIELCR SQTELEKYYI SSLTNVFIPG TQYLPTPTNL KLWELHKKVK NSIKRIIDSR LKSKCKTYGY GDDLLGVMLT 301: AAKSNEYERK MRMDEIIEEC KNFYYAGQGT TSILLTWTTM LLSLHQGWQE KLREEVFNEC GKDKIPDTDT FSKLKLMNMV LMESLRLYGP VIKISREATQ 401: DMKVGHLEIP KGTSIIIPLL KMHRDKAIWG EDAEQFNPLR FENGISQATI HPNALLPFSI GPRACIAKNF AMVEAKTVLT MILQQFQLSL SPEYKHTPVD 501: HFDLFPQYGL PVMLHPLG |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)