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AT4G27530.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
mitochondrion 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G53895.1); Has 14 Blast hits to 14 proteins in 3 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 14; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410JVWCeggNOG:ENOG41105HWEMBL:AK221437EMBL:AL035602EMBL:AL161571EMBL:BT011722EMBL:CP002687
EnsemblPlants:AT4G27530EnsemblPlants:AT4G27530.1entrez:828862GeneID:828862Gramene:AT4G27530.1HOGENOM:HOG000143355KEGG:ath:AT4G27530
OMA:EAMGTTTPhylomeDB:Q9T077PIR:T05858Proteomes:UP000006548RefSeq:NP_194483.1TAIR:AT4G27530UniGene:At.32093
UniGene:At.32094UniProt:Q9T077
Coordinates (TAIR10) chr4:+:13752640..13753122
Molecular Weight (calculated) 13548.50 Da
IEP (calculated) 5.20
GRAVY (calculated) -0.72
Length 130 amino acids
Sequence (TAIR10)
(BLAST)
001: MAAMFLAKRG AINIHRASSL HIDYNNSSRS VVDGVITITN SRYFASHGNN GEKSEEEAMG TTTDGKAPNV TLGHAADTAK EGLKRATDAA IKKSGDVGKP
101: KSVENDEGDD QEDVAVGDDG TVKGQNQSAG
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)