AT4G27370.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 0.699 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : P-loop containing nucleoside triphosphate hydrolases superfamily protein | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
member of Myosin-like proteins | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
VIIIB; FUNCTIONS IN: motor activity; INVOLVED IN: actin filament-based movement; LOCATED IN: chloroplast, myosin complex; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Myosin head, motor domain (InterPro:IPR001609), IQ calmodulin-binding region (InterPro:IPR000048); BEST Arabidopsis thaliana protein match is: myosin 2 (TAIR:AT5G54280.2); Has 7343 Blast hits to 6663 proteins in 755 species: Archae - 3; Bacteria - 49; Metazoa - 4831; Fungi - 770; Plants - 447; Viruses - 2; Other Eukaryotes - 1241 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr4:-:13694881..13700780 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 129839.00 Da | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 8.33 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.50 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Length | 1134 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
0001: MMKSSVKEIL ESLRLLDSSE RSSSLPSPST FRAPMPLIRQ SLPAKFRNAI SLESKTIEKE DKDWSTEQIT QSAEKEKTGN EVVKISTAQM SRAKNSHDPE 0101: WINSAEYFVR EKLCVWCRVA ANGQWHLGKI HSTSSSDDVC VMLSANDDVR TMEEIFPANP EILEGVEDLT QLSYLNEPSL LYNLRVRYSQ DLIYSKAGPV 0201: LIAVNPFKNV QIYGEEFLSA YQKNALDAPH VYAVADAAYD DMMREEKNQS IIISGESGAG KTETAKYAMQ YLEALGGGSF GVENEILKTN CILEAFGNAK 0301: TSRNDNSSRF GKLMEIHFSA KGKICGAKLE TFSLDQSRVA QLCNGERCYH IFYQLCAGAS PILKERLKIK AASEYNYLNQ SNCLTIDRTD DAQKFHKLME 0401: AFNIVQIPQE YQERTFALLA AVLWLGNVSF EVIDNENHVE VVADEAVTNV AMLMGCNSKK LMVVLSTCKL QAGRDCIAKR LTLRQATDMR DSLAKIIYAS 0501: LFNWLVEQIN ISLEVGNSRT GRSISILDIY GFESFKDNSF EQFCINYANE RLQQHFNRHL FKLEQEEYEG DGIDWTKVEF IDNQECLNLI EKKPIGLVSL 0601: LNEESNFPKA TDTTFANKLK QHLNANSCFK GERGRGFRIK HYAGEVLYNT NGFLEKNRDP LHVDLIQLLS LCKCQLLNLF STKMHHDFLK PATFSDSMNQ 0701: SVIAKFKGQL FKLMNKLEDT TPHFIRCIKP NSNQLPGLYE ENHVLQQLRC CGVLEIVRIS RSGYPTRLTH QELAVRYGCL LLDTRISQDP LSTSKAILKQ 0801: CNLPPEMYQV GYTKIYLRTG VISVLEERKK YVLRGILGLQ KQFRGYQTRE YFHNMRNAAV ILQSYIRGEN ARRNYIVVGE SAIVSTAITK ELDAAIHLQY 0901: MVRKWLARKL LNSTQQKNKP RNEKKKTRRK STKRVSEDKE LLSEQFEVQP CVLADLQSRV LKVEAAIMQK EDENTALQEE LQRFEERWLE NETRMKSMED 1001: TWQKHMSSMQ MSLAAACKVL APDKTASHGT DSEDTMSFGT PTKELKGSLS DVNNLSTEFD QRSVIIHEDP KSLVEVKSDS ISNRKQHAEE LRRLKSRFEK 1101: WKKDYKTRLR ETKARVRLNG DEGRHRNWWC KKSY |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)