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AT4G27180.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
cytosol 1.000
ASURE: cytosol
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:24134884 (2013): cytoskeleton microtubules
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : kinesin 2
Curator
Summary (TAIR10)
kinesin heavy chain subunit
Computational
Description (TAIR10)
kinesin 2 (ATK2); FUNCTIONS IN: microtubule binding, microtubule motor activity; INVOLVED IN: microtubule-based movement; LOCATED IN: kinesin complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Kinesin, motor region, conserved site (InterPro:IPR019821), Kinesin, motor domain (InterPro:IPR001752); BEST Arabidopsis thaliana protein match is: kinesin 3 (TAIR:AT5G54670.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:GQT-2429-MONOMERBioGrid:14113eggNOG:COG5059eggNOG:KOG0239EMBL:AL035680EMBL:AL161566EMBL:CP002687
EMBL:D21137EnsemblPlants:AT4G27180EnsemblPlants:AT4G27180.1entrez:828826Gene3D:3.40.850.10GeneID:828826Genevisible:P46864
GO:GO:0003777GO:GO:0005524GO:GO:0005737GO:GO:0005871GO:GO:0005874GO:GO:0007018GO:GO:0008017
GO:GO:0016887Gramene:AT4G27180.1hmmpanther:PTHR24115hmmpanther:PTHR24115:SF520HOGENOM:HOG000116164InParanoid:P46864InterPro:IPR001752
InterPro:IPR019821InterPro:IPR027417InterPro:IPR027640iPTMnet:P46864KEGG:ath:AT4G27180KO:K10405ncoils:Coil
OMA:KERCENTPANTHER:PTHR24115PaxDb:P46864Pfam:P46864Pfam:PF00225Pfscan:PS50067PhylomeDB:P46864
PIR:T06048PRIDE:P46864PRINTS:PR00380PRO:PR:P46864PROSITE:PS00411PROSITE:PS50067ProteinModelPortal:P46864
Proteomes:UP000006548RefSeq:NP_567768.1scanprosite:PS00411SMART:SM00129SMR:P46864STRING:3702.AT4G27180.1SUPFAM:SSF52540
TAIR:AT4G27180tair10-symbols:ATK2tair10-symbols:KATBUniGene:At.275UniProt:P46864
Coordinates (TAIR10) chr4:-:13615057..13618689
Molecular Weight (calculated) 84364.10 Da
IEP (calculated) 5.40
GRAVY (calculated) -0.60
Length 745 amino acids
Sequence (TAIR10)
(BLAST)
001: MVGEMTNNGR IRPSFPVKDL TSNEGSEYGG PVEFTREDVE TLLHERIKYK SKYNYKERCE NTMDYVKRLR LCIRWFQELE LDYAFEQEKL KNAMEMNEKH
101: CADLEVNLKV KEEELNMVID ELRKNFASVQ VQLAKEQTEK LAANESLGKE REARIAVESL QAAITEELAK TQGELQTANQ RIQAVNDMYK LLQEYNSSLQ
201: LYNSKLQGDL DEAHENIKRG EKERTGIVES IGNLKGQFKA LQDQLAASKV SQDDVMKQKD ELVNEIVSLK VEIQQVKDDR DRHITEIETL QAEATKQNDF
301: KDTINELESK CSVQNKEIEE LQDQLVASER KLQVADLSTF EKMNEFEEQK ESIMELKGRL EEAELKLIEG EKLRKKLHNT IQELKGNIRV FCRVRPLLSG
401: ENSSEEAKTI SYPTSLEALG RGIDLLQNGQ SHCFTFDKVF VPSASQEDVF VEISQLVQSA LDGYKVCIFA YGQTGSGKTY TMMGRPGNPD EKGLIPRCLE
501: QIFQTRQSLR SQGWKYELQV SMLEIYNETI RDLLSTNKEA VRADNGVSPQ KYAIKHDASG NTHVVELTVV DVRSSKQVSF LLDHAARNRS VGKTAMNEQS
601: SRSHFVFTLK ISGFNESTEQ QVQGVLNLID LAGSERLSKS GSTGDRLKET QAINKSLSSL GDVIFALAKK EDHVPFRNSK LTYLLQPCLG GDSKTLMFVN
701: ITPEPSSTGE SLCSLRFAAR VNACEIGTAH RHVNARPLDY RLSLG
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)