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AT4G26940.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
plasma membrane 0.486
endoplasmic reticulum 0.380
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : Galactosyltransferase family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Galactosyltransferase family protein; FUNCTIONS IN: transferase activity, transferring hexosyl groups, transferase activity, transferring glycosyl groups; INVOLVED IN: protein amino acid glycosylation; LOCATED IN: membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 31 (InterPro:IPR002659); BEST Arabidopsis thaliana protein match is: Galactosyltransferase family protein (TAIR:AT1G05170.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Protein Annotations
CAZy:GT31EC:2.4.1.-eggNOG:ENOG410XV5HeggNOG:KOG2288EMBL:AL035440EMBL:AL161566EMBL:AY085383
EMBL:CP002687EnsemblPlants:AT4G26940EnsemblPlants:AT4G26940.1entrez:828801GeneID:828801Genevisible:Q8LEJ9GO:GO:0000139
GO:GO:0006486GO:GO:0008378GO:GO:0016021hmmpanther:PTHR11214hmmpanther:PTHR11214:SF104HOGENOM:HOG000238809InParanoid:Q8LEJ9
IntAct:Q8LEJ9InterPro:IPR002659InterPro:IPR025298KEGG:00051+2.4.1.-KEGG:00512+2.4.1.-KEGG:00513+2.4.1.-KEGG:00514+2.4.1.-
KEGG:00522+2.4.1.-KEGG:00533+2.4.1.-KEGG:00540+2.4.1.-KEGG:00550+2.4.1.-KEGG:00561+2.4.1.-KEGG:00563+2.4.1.-KEGG:00600+2.4.1.-
KEGG:00601+2.4.1.-KEGG:00603+2.4.1.-KEGG:00604+2.4.1.-KEGG:00906+2.4.1.-KEGG:00908+2.4.1.-KEGG:00941+2.4.1.-KEGG:00942+2.4.1.-
KEGG:00944+2.4.1.-KEGG:00945+2.4.1.-KEGG:00965+2.4.1.-KEGG:ath:AT4G26940ncoils:CoilOMA:CAGMLFSPANTHER:PTHR11214
PaxDb:Q8LEJ9Pfam:PF01762Pfam:PF13334Pfam:Q8LEJ9PhylomeDB:Q8LEJ9PIR:T04817PRIDE:Q8LEJ9
PRO:PR:Q8LEJ9ProteinModelPortal:Q8LEJ9Proteomes:UP000006548RefSeq:NP_567762.1RefSeq:NP_849454.1STRING:3702.AT4G26940.1TAIR:AT4G26940
UniGene:At.22123UniPathway:UPA00378UniProt:Q8LEJ9
Coordinates (TAIR10) chr4:-:13529911..13532387
Molecular Weight (calculated) 46022.70 Da
IEP (calculated) 7.29
GRAVY (calculated) -0.44
Length 407 amino acids
Sequence (TAIR10)
(BLAST)
001: MSLKHHHRGL ELSASKSFVS KKWTLFLCIG FFCAGILFSD RMWPEPESNV VSRDTVASDE RLRLESEDCD SSKKGLKRES KDILGDVYKS PDAIQTLDKT
101: ISKLETELAD ARAAQESIMN GSPVSDDFKL PETVTKRKYL MVVGVNTAFS SRKRRDSVRA TWMPPGEERK KLEEEKGIVM RFVIGHSSTP GGILDRAIQA
201: EESKHGDFLR LDHVEGYLEL SAKTKTYFTT AFAMWDADFY VKVDDDVHVN IATLGAELAR YRMKPRVYIG CMKSGPVLAQ KGVRYHEPEY WKFGEEGNKY
301: FRHATGQLYA ISRELASYIS INQNVLHKYV NEDVSLGSWF LGLDVEHVDD RRLCCGTTDC EWKAQAGNIC VASFDWSCSG ICRSADRMKD VHRRCGEGEK
401: ALLAASF
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)