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AT4G26770.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
plasma membrane 0.989
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Phosphatidate cytidylyltransferase family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Phosphatidate cytidylyltransferase family protein; FUNCTIONS IN: phosphatidate cytidylyltransferase activity; INVOLVED IN: phospholipid biosynthetic process; LOCATED IN: membrane; EXPRESSED IN: petal, leaf whorl, flower, pollen tube; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Phosphatidate cytidylyltransferase (InterPro:IPR000374), Phosphatidate cytidylyltransferase, eukaryota (InterPro:IPR016720); BEST Arabidopsis thaliana protein match is: CDP-diacylglycerol synthase 1 (TAIR:AT1G62430.1); Has 7211 Blast hits to 7203 proteins in 2581 species: Archae - 0; Bacteria - 5077; Metazoa - 186; Fungi - 148; Plants - 138; Viruses - 0; Other Eukaryotes - 1662 (source: NCBI BLink).
Protein Annotations
EC:2.7.7.41eggNOG:COG0575eggNOG:KOG1440EMBL:AL035440EMBL:AL161565EMBL:CP002687EMBL:DQ446870
EMBL:DQ653225EnsemblPlants:AT4G26770EnsemblPlants:AT4G26770.1entrez:828784GeneID:828784Genevisible:Q1PE48GO:GO:0004605
GO:GO:0016021GO:GO:0016024Gramene:AT4G26770.1gramene_pathway:2.7.7.41gramene_pathway:PWY-5667gramene_pathway:PWY0-1319hmmpanther:PTHR13773
hmmpanther:PTHR13773:SF10HOGENOM:HOG000209582InterPro:IPR000374InterPro:IPR016720iPTMnet:Q1PE48KEGG:00564+2.7.7.41KEGG:04070+2.7.7.41
KEGG:ath:AT4G26770KO:K00981OMA:QRVAHEPPaxDb:Q1PE48Pfam:PF01148Pfam:Q1PE48PhylomeDB:Q1PE48
PIR:T04800PIRSF:PIRSF018269PRIDE:Q1PE48PRO:PR:Q1PE48PROSITE:PS01315ProteinModelPortal:Q1PE48Proteomes:UP000006548
Reactome:R-ATH-1483148Reactome:R-ATH-1483226RefSeq:NP_194407.5scanprosite:PS01315SMR:Q1PE48STRING:3702.AT4G26770.1TAIR:AT4G26770
TMHMM:TMhelixUniGene:At.2590UniGene:At.50368UniPathway:UPA00557UniProt:Q1PE48
Coordinates (TAIR10) chr4:+:13482580..13484697
Molecular Weight (calculated) 54927.20 Da
IEP (calculated) 10.14
GRAVY (calculated) 0.04
Length 471 amino acids
Sequence (TAIR10)
(BLAST)
001: MAMEKDLSPN SPRIRKLRDT SYPTTPTSRM NTNNQRDNHY PNIPNSPRDY NYTPSSPTAR IRHRRRSSEN LAEVNRSNVS RVSNLLLGDK NKYRSMWIRT
101: CSSLWMLGGV VFIIYMGHLY IWAMVVVIQI FMAKELFFLR RRAHEERRLP GFWLLNWHFF FTAMLFVYGR IIQQQLVNTV SSDRFIYKLV SGLIKYQMVI
201: CYFLYIAGLI WFILTLKNKM YKYQFGQYAW THMILIVVFT QSSFTVANIF EGIFWFLLPA ALIAMNDVAA YFFGFYFGKT PLIKLSPKKT WEGFIGASVA
301: TIISAFIFAN VLGQFQWLTC PRKDLSTGWL HCDPGPLFRP EYYPFPSWIT PFSPWKGIST LPVQWHAFSL GLFASIMAPF GGFFASGFKR AFKIKDFGDS
401: IPGHGGFTDR MDCQMVMAVF AYIYIQSFIV NRDYSVEMIL DQISRSLGHE EQKMLYEKLG DILQHKLQGR F
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)