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AT4G26720.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
cytosol 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : protein phosphatase X 1
Curator
Summary (TAIR10)
Encodes catalytic subunit of protein phosphatase X. Expressed at very low levels in A. thaliana flowers, leaves, stems and roots.
Computational
Description (TAIR10)
protein phosphatase X 1 (PPX1); CONTAINS InterPro DOMAIN/s: Metallophosphoesterase (InterPro:IPR004843), Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase (InterPro:IPR006186); BEST Arabidopsis thaliana protein match is: protein phosphatase X 2 (TAIR:AT5G55260.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT4G26720-MONOMERBioGrid:14066EC:3.1.3.16eggNOG:COG0639eggNOG:KOG0372EMBL:AF030289EMBL:AL035440
EMBL:AL161565EMBL:CP002687EMBL:Z22587EnsemblPlants:AT4G26720EnsemblPlants:AT4G26720.1entrez:828779Gene3D:3.60.21.10
GeneID:828779Genevisible:P48529GO:GO:0004722GO:GO:0005634GO:GO:0005737GO:GO:0006470GO:GO:0009532
GO:GO:0046872Gramene:AT4G26720.1hmmpanther:PTHR11668hmmpanther:PTHR11668:SF278HOGENOM:HOG000172696InParanoid:P48529InterPro:IPR004843
InterPro:IPR006186InterPro:IPR029052KEGG:ath:AT4G26720KO:K15423OMA:PQMDYFLPaxDb:P48529Pfam:P48529
Pfam:PF00149PhylomeDB:P48529PIR:S42558PRIDE:P48529PRINTS:PR00114PRO:PR:P48529PROSITE:PS00125
ProteinModelPortal:P48529Proteomes:UP000006548RefSeq:NP_194402.1scanprosite:PS00125SMART:SM00156SMR:P48529STRING:3702.AT4G26720.1
SUPFAM:SSF56300TAIR:AT4G26720tair10-symbols:PPX-1tair10-symbols:PPX1UniGene:At.106UniProt:P48529
Coordinates (TAIR10) chr4:-:13470397..13472154
Molecular Weight (calculated) 34739.50 Da
IEP (calculated) 4.76
GRAVY (calculated) -0.21
Length 305 amino acids
Sequence (TAIR10)
(BLAST)
001: MSDLDRQIGQ LKRCEPLSES EVKALCLKAM EILVEESNVQ RVDAPVTLCG DIHGQFYDMM ELFKVGGDCP KTNYLFMGDF VDRGYYSVET FLLLLALKVR
101: YPDRITLIRG NHESRQITQV YGFYDECLRK YGSSNVWRYC TDIFDYMSLS AVVENKIFCV HGGLSPAIMT LDQIRTIDRK QEVPHDGAMC DLLWSDPEDI
201: VDGWGLSPRG AGFLFGGSVV TSFNHSNNID YIARAHQLVM EGYKWMFDSQ IVTVWSAPNY CYRCGNVASI LELDENLNKE FRVFDAAQQD SRGPPAKKPA
301: PDYFL
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)