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AT4G26670.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
plastid 1.000
ASURE: plastid
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:25641898 (2015): plasma membrane
  • PMID:24872594 (2014): plastid plastid envelope plastid outer membrane
  • PMID:20061580 (2010): plastid plastid envelope
  • PMID:18431481 (2008): plastid
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein; FUNCTIONS IN: protein transporter activity, P-P-bond-hydrolysis-driven protein transmembrane transporter activity; INVOLVED IN: protein transport; LOCATED IN: chloroplast, mitochondrial inner membrane presequence translocase complex, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial inner membrane translocase complex, subunit Tim17/22 (InterPro:IPR003397); BEST Arabidopsis thaliana protein match is: Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein (TAIR:AT5G55510.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Protein Annotations
DNASU:828774eggNOG:COG5596eggNOG:KOG1652EMBL:AF410323EMBL:AL035440EMBL:AL161565EMBL:AY088301
EMBL:AY102132EMBL:CP002687EMBL:DQ405270EnsemblPlants:AT4G26670EnsemblPlants:AT4G26670.1entrez:828774GeneID:828774
Genevisible:Q94EH2GO:GO:0005743GO:GO:0009507GO:GO:0009941GO:GO:0015266GO:GO:0016021GO:GO:0033365
GO:GO:0071806Gramene:AT4G26670.1hmmpanther:PTHR14110hmmpanther:PTHR14110:SF1HOGENOM:HOG000239820InParanoid:Q94EH2InterPro:IPR003397
iPTMnet:Q94EH2KEGG:ath:AT4G26670OMA:CLFRFAGPaxDb:Q94EH2Pfam:PF02466Pfam:Q94EH2PhylomeDB:Q94EH2
PIR:T04790PRIDE:Q94EH2PRO:PR:Q94EH2Proteomes:UP000006548RefSeq:NP_567754.1STRING:3702.AT4G26670.1TAIR:AT4G26670
UniGene:At.2584UniProt:Q94EH2
Coordinates (TAIR10) chr4:+:13452257..13453579
Molecular Weight (calculated) 21812.10 Da
IEP (calculated) 7.83
GRAVY (calculated) 0.14
Length 210 amino acids
Sequence (TAIR10)
(BLAST)
001: MAANDSSNAI DIDGNLDSDS NLNTDGDEAT DNDSSKALVT IPAPAVCLFR FAGDAAGGAV MGSIFGYGSG LFKKKGFKGS FADAGQSAKT FAVLSGVHSL
101: VVCLLKQIRG KDDAINVGVA GCCTGLALSF PGAPQALLQS CLTFGAFSFI LEGLNKRQTA LAHSVSLRHQ TGLFQDHHRA LPLSLALPIP EEIKGAFSSF
201: CKSLAKPRKF
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)