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AT4G26560.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
cytosol 0.529
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : calcineurin B-like protein 7
Curator
Summary (TAIR10)
Encodes calcineurin B-like protein 7 (CBL7).
Computational
Description (TAIR10)
calcineurin B-like protein 7 (CBL7); CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), Recoverin (InterPro:IPR001125), EF-HAND 2 (InterPro:IPR018249), Calcineurin B protein (InterPro:IPR015757), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048); BEST Arabidopsis thaliana protein match is: calcineurin B-like 3 (TAIR:AT4G26570.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Protein Annotations
BioGrid:14050eggNOG:COG5126eggNOG:KOG0034EMBL:AF290434EMBL:AL022223EMBL:AL078465EMBL:AL161565
EMBL:CP002687EnsemblPlants:AT4G26560EnsemblPlants:AT4G26560.1entrez:828763Gene3D:1.10.238.10GeneID:828763Genevisible:Q9SUA6
GO:GO:0005509GO:GO:0005513GO:GO:0005634GO:GO:0005737Gramene:AT4G26560.1hmmpanther:PTHR23056hmmpanther:PTHR23056:SF39
HOGENOM:HOG000233019InParanoid:Q9SUA6IntAct:Q9SUA6InterPro:IPR002048InterPro:IPR011992InterPro:IPR018247KEGG:ath:AT4G26560
KO:K06268OMA:FTHYVIVPaxDb:Q9SUA6Pfam:PF13202Pfam:PF13405Pfam:Q9SUA6Pfscan:PS50222
PhylomeDB:Q9SUA6PIR:T05048PIR:T08922PRIDE:Q9SUA6PRO:PR:Q9SUA6PROSITE:PS00018PROSITE:PS50222
ProteinModelPortal:Q9SUA6Proteomes:UP000006548RefSeq:NP_194386.1scanprosite:PS00018SMART:SM00054SMR:Q9SUA6STRING:3702.AT4G26560.1
SUPFAM:SSF47473TAIR:AT4G26560tair10-symbols:CBL7UniGene:At.3373UniProt:Q9SUA6
Coordinates (TAIR10) chr4:-:13406733..13407973
Molecular Weight (calculated) 24405.70 Da
IEP (calculated) 4.53
GRAVY (calculated) -0.38
Length 214 amino acids
Sequence (TAIR10)
(BLAST)
001: MDSTRNSASS NSTGCFTDQK KRKALYEVFK KLSGVDCQRN EGNVVEGVTC YYGEMNKEQF HVAIFQTDKN ESLFSERVFD LFDTNHDGLL GFEEFARALS
101: VFHPSAPIDD KIDLSFQLYD LKQQGFIERQ GVKQLVVATL AASGMSQSDE IVESIIDKTF VQADTKHEGM IDEEEWMDLV FRHPLLLKNM TLQYLKDITT
201: TFPSFVLHSQ VEDT
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)