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AT4G26455.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
cytosol 0.873
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:24134884 (2013): cytoskeleton microtubules
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no coexpression data
Description (TAIR10) protein_coding : WPP domain interacting protein 1
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
WPP domain interacting protein 1 (WIP1); FUNCTIONS IN: protein homodimerization activity, protein heterodimerization activity; LOCATED IN: nuclear envelope, cell plate; EXPRESSED IN: root; BEST Arabidopsis thaliana protein match is: WPP domain interacting protein 2 (TAIR:AT5G56210.1); Has 450 Blast hits to 403 proteins in 126 species: Archae - 15; Bacteria - 85; Metazoa - 55; Fungi - 14; Plants - 89; Viruses - 10; Other Eukaryotes - 182 (source: NCBI BLink).
Protein Annotations
BioGrid:927646DIP:DIP-46425NeggNOG:ENOG410IHEQeggNOG:ENOG410YHC5EMBL:AK118341EMBL:AK228147EMBL:AL022223
EMBL:AL161565EMBL:BT003145EMBL:CP002687EMBL:EF554923EnsemblPlants:AT4G26455EnsemblPlants:AT4G26455.1entrez:7922386
GeneID:7922386GO:GO:0005635GO:GO:0006997GO:GO:0009504GO:GO:0016021GO:GO:0031965GO:GO:0046982
Gramene:AT4G26455.1hmmpanther:PTHR34562hmmpanther:PTHR34562:SF1HOGENOM:HOG000093093IntAct:Q8GXA4iPTMnet:Q8GXA4KEGG:ath:AT4G26455
ncoils:CoilOMA:REQHHEGPaxDb:Q8GXA4Pfam:Q8GXA4PhylomeDB:Q8GXA4PIR:T05059PRIDE:Q8GXA4
PRO:PR:Q8GXA4ProteinModelPortal:Q8GXA4Proteomes:UP000006548RefSeq:NP_001154269.1SMR:Q8GXA4STRING:3702.AT4G26455.1TAIR:AT4G26455
tair10-symbols:WIP1UniGene:At.74538UniProt:Q8GXA4
Coordinates (TAIR10) chr4:+:13365737..13367384
Molecular Weight (calculated) 53904.70 Da
IEP (calculated) 4.46
GRAVY (calculated) -0.67
Length 489 amino acids
Sequence (TAIR10)
(BLAST)
001: MDLESESSAL ESVDDNVLIQ QSASNVCDDG RSLDNGSCSD ESVKLLSTSN SVELGKPMSF DSPGDGGGAY SPVLKGQGLR KWRRIRRDLV KDTSANMENS
101: KALKRGLSGV AHSHGKQMQF QSPEVEQESQ GSVGSVNMLK SSGDGFDILG SSGYDSRFVA GVGFSAGMDL EIDDDRSSKS STVARAPKVI RYEKPMISSG
201: QGGNIRVENS KKHRGESVDF EKENSYSSLE SDSRKQSGRM MDYNGENGET SMRKDDAGGE GGESINTDNR YSDEMDPLTE AINGFLALQD ALEKEVQQFQ
301: EIGNEPMPQH HEQVSEANSP HPEIVTLVNN VEQLENMLEE TRSMLEVKES HIRDLESTTN QSKHSWGGTE IVVEDIFRQK IEAEIEYLIY SRSIDNLNSQ
401: MKLIDEQESL AEEQTHETLN KLGRVQTKAA NFTNRAQDLQ NDCIEITGTI KKRACKITSY VLIQLVLLST VVLLLLSQLL PEPDTVVPT
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)