AT4G26280.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:cytosol 0.997 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : P-loop containing nucleoside triphosphate hydrolases superfamily protein | ||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: sulfotransferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: embryo, sepal, flower, seed; EXPRESSED DURING: petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Sulfotransferase domain (InterPro:IPR000863); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT5G43690.1); Has 2654 Blast hits to 2620 proteins in 183 species: Archae - 0; Bacteria - 186; Metazoa - 1675; Fungi - 1; Plants - 535; Viruses - 0; Other Eukaryotes - 257 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr4:-:13304721..13305722 | ||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 36286.50 Da | ||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 8.01 | ||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.49 | ||||||||||||||||||||||||||||||||||||||||
| Length | 314 amino acids | ||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MEKWMNLRDE DLTEETKTLI SSLSSEKGYL GRNLCKYQGS WYYYNFLQGV LNFQRGFKPQ DTDIIVASYP KSGTLWLKAL TVALFERTKN PSHDDPMSHP 101: LLSNNPHNLL SSSSPRLFST HTPFHTLQVA VKDSPCKVVY ICRDAKDSLV SRWHIVCRSL NKEEDRTILE SMFESFCSGV CLFGPFWDHI LSYWKASLEK 201: PKQVLFMRYD EIKTDPHGQL KKLAEFLGCP FSKEEEKNGS LNKILEMCSL PNLSSLEVNK TGKSINGIEY KNHFRKGIVG DWKNHLTPEM GSKIDMIMKE 301: KLKDYSEVWF ENAL |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)