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AT4G26270.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
cytosol 1.000
ASURE: cytosol
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:25900983 (2015): Golgi trans-Golgi network multivesicular body
  • PMID:23396599 (2013): nucleus nuclear envelope nuclear inner membrane
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : phosphofructokinase 3
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
phosphofructokinase 3 (PFK3); CONTAINS InterPro DOMAIN/s: Pyrophosphate-dependent phosphofructokinase TP0108 (InterPro:IPR012004), Phosphofructokinase (InterPro:IPR000023); BEST Arabidopsis thaliana protein match is: phosphofructokinase 7 (TAIR:AT5G56630.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT4G26270-MONOMERBioGrid:14020BRENDA:2.7.1.11DNASU:828733EC:2.7.1.11eggNOG:COG0205eggNOG:KOG2440
EMBL:AL049171EMBL:AL161564EMBL:AY049245EMBL:AY090267EMBL:CP002687EnsemblPlants:AT4G26270EnsemblPlants:AT4G26270.1
entrez:828733GeneID:828733Genevisible:Q94AA4GO:GO:0003872GO:GO:0005524GO:GO:0005829GO:GO:0006002
GO:GO:0006096GO:GO:0010053GO:GO:0046872GO:GO:0061615Gramene:AT4G26270.1gramene_pathway:2.7.1.11gramene_pathway:GLYCOLYSIS
gramene_pathway:PWY-1042HAMAP:MF_01981hmmpanther:PTHR13697hmmpanther:PTHR13697:SF7HOGENOM:HOG000016186InParanoid:Q94AA4IntAct:Q94AA4
InterPro:IPR000023InterPro:IPR012004InterPro:IPR022953KEGG:00010+2.7.1.11KEGG:00030+2.7.1.11KEGG:00051+2.7.1.11KEGG:00052+2.7.1.11
KEGG:00680+2.7.1.11KEGG:ath:AT4G26270KO:K00850ncoils:CoilOMA:CGYVLEDPaxDb:Q94AA4Pfam:PF00365
Pfam:Q94AA4PhylomeDB:Q94AA4PIR:T06011PIRSF:PIRSF000534PRIDE:Q94AA4PRINTS:PR00476PRO:PR:Q94AA4
ProteinModelPortal:Q94AA4Proteomes:UP000006548Reactome:R-ATH-70171RefSeq:NP_567742.1SMR:Q94AA4STRING:3702.AT4G26270.1SUPFAM:SSF53784
TAIR:AT4G26270tair10-symbols:PFK3UniGene:At.2887UniPathway:UPA00109UniProt:Q94AA4
Coordinates (TAIR10) chr4:-:13301094..13304030
Molecular Weight (calculated) 53669.50 Da
IEP (calculated) 7.08
GRAVY (calculated) -0.19
Length 489 amino acids
Sequence (TAIR10)
(BLAST)
001: MSTVESSKPK IINGSCGYVL EDVPHLSDYL PGLPTYPNPL QDNPAYSVVK QYFVDADDSV PQKIVVHKDG PRGIHFRRAG PRQKVYFESD EVHACIVTCG
101: GLCPGLNTVI REIVSSLSYM YGVKRILGID GGYRGFYAKN TVSLDSKVVN DIHKRGGTIL GTSRGGHDTT KIVDSIQDRG INQVYIIGGD GTQRGASVIF
201: EEIRRRGLKV AVIGIPKTID NDIPVIDKSF GFDTAVEEAQ RAINAAHVEA ESIENGIGVV KLMGRYSGFI AMYATLASRD VDCCLIPESP FYLEGEGGLF
301: EYIEKRLKES GHMVLVIAEG AGQDLMSKSM ESMTLKDASG NKLLKDVGLW LSQSIKDHFN QKKMVMNLKY IDPTYMIRAV PSNASDNVYC TLLAQSAVHG
401: AMAGYTGYIS GLVNGRQTYI PFYRITEKQN HVVITDRMWA RLLSSTNQPS FLGPKDVFDN KEKPMSALLD DGNCNGVVDV PPVTKEITK
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)