suba logo
AT4G26070.1
Subcellular Consensus
(Prediction and Experimental)

min: heatmap :max

.
SUBAcon:
cytosol 0.972
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : MAP kinase/ ERK kinase 1
Curator
Summary (TAIR10)
Member of MAP Kinase Kinase. Likely functions in a stress-activated MAPK pathway. Can phosphorylate the MAPK AtMPK4, in response to stress. Gets phosphorylated by MEKK1 in response to wounding.
Computational
Description (TAIR10)
MAP kinase/ ERK kinase 1 (MEK1); CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: MAP kinase kinase 2 (TAIR:AT4G29810.1); Has 128112 Blast hits to 126672 proteins in 4377 species: Archae - 175; Bacteria - 14621; Metazoa - 47197; Fungi - 12494; Plants - 32367; Viruses - 521; Other Eukaryotes - 20737 (source: NCBI BLink).
Protein Annotations
EnsemblPlants:AT4G26070EnsemblPlants:AT4G26070.1entrez:828713hmmpanther:PTHR24361hmmpanther:PTHR24361:SF385Pfam:PF00069Pfscan:PS50011
scanprosite:PS00107scanprosite:PS00108tair10-symbols:ATMEK1tair10-symbols:MEK1tair10-symbols:MKK1tair10-symbols:NMAPKK
Coordinates (TAIR10) chr4:+:13217797..13219381
Molecular Weight (calculated) 34089.20 Da
IEP (calculated) 7.90
GRAVY (calculated) -0.10
Length 308 amino acids
Sequence (TAIR10)
(BLAST)
001: MNRGSLCPNP ICLPPLEQSI SKFLTQSGTF KDGDLRVNKD GIQTVSLSEP GAPPPIEPLD NQLSLADLEV IKVIGKGSSG NVQLVKHKLT QQFFALKVIQ
101: LNTEESTCRA ISQELRINLS SQCPYLVSCY QSFYHNGLVS IILEFMDGGS LADLLKKVGK VPENMLSAIC KRVLRGLCYI HHERRIIHRD LKPSNLLINH
201: RGEVKITDFG VSKILTSTSS LANSFVGTYP YMSPERISGS LYSNKSDIWS LGLVLLECAT GKFPYTPPEH KKGWSSVYEL VDAIVENPPP CAPSNLFSPE
301: FCSFISQW
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)