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AT4G26010.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
extracellular 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:26572690 (2016): extracellular region plant-type cell wall
  • PMID:25900983 (2015): Golgi
  • PMID:25900983 (2015): Golgi Golgi apparatus Golgi membrane
  • PMID:25900983 (2015): Golgi trans-Golgi network
  • PMID:25900983 (2015): Golgi trans-Golgi network early endosome
  • PMID:25900983 (2015): Golgi trans-Golgi network multivesicular body
  • PMID:25900983 (2015): plant-type vacuole plant-type vacuole membrane
  • PMID:19334764 (2009): plasma membrane
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Peroxidase superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: oxidation reduction, response to oxidative stress; LOCATED IN: endomembrane system; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidase, active site (InterPro:IPR019794), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT1G34510.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT4G26010-MONOMEREC:1.11.1.7eggNOG:ENOG410IEWYeggNOG:ENOG4110UVGEMBL:AF412066EMBL:AF428430EMBL:AF452386
EMBL:AL049483EMBL:AL161564EMBL:AY090260EMBL:CP002687EnsemblPlants:AT4G26010EnsemblPlants:AT4G26010.1entrez:828707
GeneID:828707Genevisible:Q93V93GO:GO:0004601GO:GO:0005576GO:GO:0006979GO:GO:0020037GO:GO:0042744
GO:GO:0046872Gramene:AT4G26010.1hmmpanther:PTHR31235hmmpanther:PTHR31235:SF13HOGENOM:HOG000237556InParanoid:Q93V93InterPro:IPR000823
InterPro:IPR002016InterPro:IPR010255InterPro:IPR019794KEGG:00940+1.11.1.7KEGG:ath:AT4G26010KO:K00430OMA:NQISEKD
PaxDb:Q93V93PeroxiBase:210Pfam:PF00141Pfam:Q93V93Pfscan:PS50873PhylomeDB:Q93V93PIR:T04256
PRIDE:Q93V93PRINTS:PR00458PRINTS:PR00461PRO:PR:Q93V93PROSITE:PS00436PROSITE:PS50873ProteinModelPortal:Q93V93
Proteomes:UP000006548RefSeq:NP_567738.1scanprosite:PS00436SMR:Q93V93STRING:3702.AT4G26010.1SUPFAM:SSF48113TAIR:AT4G26010
UniGene:At.2955UniProt:Q93V93
Coordinates (TAIR10) chr4:+:13200653..13201688
Molecular Weight (calculated) 33807.60 Da
IEP (calculated) 10.49
GRAVY (calculated) -0.19
Length 310 amino acids
Sequence (TAIR10)
(BLAST)
001: MRSITALFFL FCFLAPSALA QLRTGFYSRS CPRAESIVAS VVANRFRSDK SITAAFLRMQ FHDCFVRGCD ASLLIDPRPG RPSEKSTGPN ASVRGYEIID
101: EAKRQLEAAC PRTVSCADIV TLATRDSVAL AGGPRFSVPT GRRDGLRSNP NDVNLPGPTI PVSASIQLFA AQGMNTNDMV TLIGGGHSVG VAHCSLFQDR
201: LSDRAMEPSL KSSLRRKCSS PNDPTTFLDQ KTSFTVDNAI YGEIRRQRGI LRIDQNLGLD RSTSGIVSGY ASSNTLFRKR FAEALVKMGT IKVLTGRSGE
301: IRRNCRVFNN
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)