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AT4G25570.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
vacuole 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:31615849 (2019): plastid plastid thylakoid
  • PMID:30962257 (2019): plastid
  • PMID:23903016 (2013): plant-type vacuole plant-type vacuole membrane
  • PMID:23673981 (2013): plastid plastid stroma plastoglobules
  • PMID:21988472 (2012): plant-type vacuole plant-type vacuole membrane
  • PMID:18431481 (2008): plastid
  • PMID:15215502 (2004): plant-type vacuole
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : Cytochrome b561/ferric reductase transmembrane protein family
Curator
Summary (TAIR10)
Encodes cytochrome b561.
Computational
Description (TAIR10)
ACYB-2; FUNCTIONS IN: carbon-monoxide oxygenase activity; LOCATED IN: integral to membrane, chloroplast, vacuole; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome b561, eukaryote (InterPro:IPR004877), Cytochrome b561/ferric reductase transmembrane (InterPro:IPR006593); BEST Arabidopsis thaliana protein match is: cytochrome B561-1 (TAIR:AT5G38630.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Protein Annotations
BioGrid:13949BRENDA:1.16.5.1EC:1.16.5.1eggNOG:ENOG4111FKI
eggNOG:KOG1619EMBL:AB049628EMBL:AL022197EMBL:AL161563
EMBL:AY085603EMBL:AY120730EMBL:BT002176EMBL:CP002687
EnsemblPlants:AT4G25570EnsemblPlants:AT4G25570.1entrez:828662GeneID:828662
Genevisible:Q8L856GO:GO:0005773GO:GO:0005774GO:GO:0009507
GO:GO:0016021GO:GO:0016491GO:GO:0046872Gramene:AT4G25570.1
gramene_pathway:1.16.1.7gramene_pathway:PWY-5934hmmpanther:PTHR10106hmmpanther:PTHR10106:SF17
HOGENOM:HOG000231044InParanoid:Q8L856IntAct:Q8L856InterPro:IPR006593
KEGG:ath:AT4G25570KO:K08360OMA:ICAAFKNPaxDb:Q8L856
Pfam:PF03188Pfam:Q8L856Pfscan:PS50939PhylomeDB:Q8L856
PIR:E85295PIR:T05790PRIDE:Q8L856PRO:PR:Q8L856
PROSITE:PS50939ProteinModelPortal:Q8L856Proteomes:UP000006548Reactome:R-ATH-917937
RefSeq:NP_567723.1SMART:SM00665SMR:Q8L856STRING:3702.AT4G25570.1
TAIR:AT4G25570tair10-symbols:ACYB-2TMHMM:TMhelixUniGene:At.25580
UniProt:Q8L856
Coordinates (TAIR10) chr4:-:13053887..13055518
Molecular Weight (calculated) 25866.00 Da
IEP (calculated) 7.29
GRAVY (calculated) 0.85
Length 239 amino acids
Sequence (TAIR10)
(BLAST)
001: MAVRINAMAV TFVAHALAVI AAIMVLVWSI SYRGGLAWEA TNKNLIFNLH PVLMLIGFII LGGEAIISYK SLPLEKPVKK LIHLILHAIA LALGIFGICA
101: AFKNHNESHI PNLYSLHSWI GIGVISLYGF QWVYSFIVFF FPGGSTNLKS GLLPWHAMLG LFVYILAVGN AALGFLEKLT FLENGGLDKY GSEAFLINFT
201: AIITILFGAF VVLTASAESP SPSPSVSNDD SVDFSYSAI
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)