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AT4G25160.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
plastid 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : U-box domain-containing protein kinase family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
U-box domain-containing protein kinase family protein; FUNCTIONS IN: ubiquitin-protein ligase activity, protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, protein ubiquitination, response to stress; LOCATED IN: ubiquitin ligase complex; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: UspA (InterPro:IPR006016), Protein kinase, ATP binding site (InterPro:IPR017441), U box domain (InterPro:IPR003613), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Protein kinase, catalytic domain (InterPro:IPR000719); BEST Arabidopsis thaliana protein match is: U-box domain-containing protein kinase family protein (TAIR:AT5G61550.1); Has 118360 Blast hits to 115683 proteins in 4597 species: Archae - 135; Bacteria - 13482; Metazoa - 43605; Fungi - 9605; Plants - 33456; Viruses - 341; Other Eukaryotes - 17736 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT4G25160-MONOMERBioGrid:13906EC:2.7.11.-EC:6.3.2.-eggNOG:COG0515eggNOG:ENOG410IJ5MEMBL:AL035396
EMBL:AL035523EMBL:AL161562EMBL:BX828107EMBL:CP002687EnsemblPlants:AT4G25160EnsemblPlants:AT4G25160.1entrez:828619
Gene3D:3.30.40.10Gene3D:3.40.50.620GeneID:828619Genevisible:Q9SW11GO:GO:0004674GO:GO:0004842GO:GO:0005524
GO:GO:0006950GO:GO:0016874Gramene:AT4G25160.1hmmpanther:PTHR27003hmmpanther:PTHR27003:SF29HOGENOM:HOG000237993InParanoid:Q9SW11
IntAct:Q9SW11InterPro:IPR000719InterPro:IPR001245InterPro:IPR003613InterPro:IPR006016InterPro:IPR008271InterPro:IPR011009
InterPro:IPR013083InterPro:IPR014729InterPro:IPR017441KEGG:ath:AT4G25160ncoils:CoilOMA:GPVGTLCPaxDb:Q9SW11
Pfam:PF00582Pfam:PF04564Pfam:PF07714Pfam:Q9SW11Pfscan:PS50011Pfscan:PS51698PhylomeDB:Q9SW11
PIR:T05537PRIDE:Q9SW11PRO:PR:Q9SW11PROSITE:PS00107PROSITE:PS00108PROSITE:PS50011PROSITE:PS51698
ProteinModelPortal:Q9SW11Proteomes:UP000006548Reactome:R-ATH-5213460RefSeq:NP_194246.2scanprosite:PS00107scanprosite:PS00108SMART:SM00220
SMART:SM00504SMR:Q9SW11STRING:3702.AT4G25160.1SUPFAM:SSF52402SUPFAM:SSF56112SUPFAM:SSF57850TAIR:AT4G25160
UniGene:At.32287UniPathway:UPA00143UniProt:Q9SW11
Coordinates (TAIR10) chr4:-:12903360..12906669
Molecular Weight (calculated) 93759.10 Da
IEP (calculated) 6.48
GRAVY (calculated) -0.49
Length 835 amino acids
Sequence (TAIR10)
(BLAST)
001: MSRSPDKLAL PPPPPPPPSR TVVVALSGSS KSKYVVTWAI EKFATEGNVG FKLLHIHPMI TSVPTPMGNA IPISEVRDDV VTAYRQEILW QSEEMLKPYT
101: KLFVRRKVAV EVLVIESDNV AAAIAEEVTR DSIDRIVIGG SSRSFFSRKA DICSVISALM PNFCTVYVVS KGKLSCVRPS DSDGNATIRE DGSERTNSSS
201: GSSGPTSDSS DVMSSAHDSQ SRPLSLPVRR MQHFPAIAGQ ASVPMETSSV GSDETRCMSL DAEEARDVSS INRSSTDTTS RWTPRRRDYE ERKEAMSSSS
301: SNREYGNFGT RFSWSGMGVD TTHSRASQQA SNMSDALSEQ SYTDNQVNLN FEVEKLRAEL RHVQEMYAVA QTETFDASRK LGELNQRRLE EAIKLEELKL
401: KEYEARELAE KEKQNFEKAR RDAESMRERA EREIAQRREA ERKSARDTKE KEKLEGTLGS PQLQYQHFAW EEIMAATSSF SEELKIGMGA YGAVYKCNLH
501: HTTAVVKVLQ SAENQLSKQF QQELEILSKI RHPHLVLLLG ACPEQGALVY EYMENGSLED RLFQVNNSPP LPWFERFRIA WEVAAALVFL HKSKPKPIIH
601: RDLKPANILL DHNFVSKVGD VGLSTMVQVD PLSTKFTIYK QTSPVGTLCY IDPEYQRTGR ISSKSDIYSF GMILLQLLTA KPAIALTHFV ESAMDSNDEF
701: LKILDQKAGN WPIEETRELA ALALCCTELR GKDRPDLKDQ ILPALENLKK VAEKARNSFS GVSTQPPTHF ICPLLKDVMN EPCVAADGYT YDRHAIEEWL
801: KEHNTSPMTD SPLHSKNLLP NYTLYTAIME WRSTR
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)