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AT4G24480.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
cytosol 0.592
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Protein kinase superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine/tyrosine kinase activity, kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 4 anthesis, LP.10 ten leaves visible, petal differentiation and expansion stage, LP.12 twelve leaves visible; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT5G03730.1); Has 116789 Blast hits to 115063 proteins in 4587 species: Archae - 100; Bacteria - 12435; Metazoa - 44447; Fungi - 10166; Plants - 32138; Viruses - 424; Other Eukaryotes - 17079 (source: NCBI BLink).
Protein Annotations
eggNOG:COG0515eggNOG:KOG0192EMBL:CP002687EnsemblPlants:AT4G24480EnsemblPlants:AT4G24480.1entrez:828550GeneID:828550
GO:GO:0004674GO:GO:0005524Gramene:AT4G24480.1hmmpanther:PTHR23257hmmpanther:PTHR23257:SF349InParanoid:F4JQX7InterPro:IPR000719
InterPro:IPR001245InterPro:IPR008271InterPro:IPR011009InterPro:IPR017441iPTMnet:F4JQX7KEGG:ath:AT4G24480OMA:ITQNGNC
PaxDb:F4JQX7Pfam:PF07714Pfam:PF14381Pfscan:PS50011PRIDE:F4JQX7PRINTS:PR00109PROSITE:PS00107
PROSITE:PS00108PROSITE:PS50011ProteinModelPortal:F4JQX7Proteomes:UP000006548RefSeq:NP_194179.2scanprosite:PS00107scanprosite:PS00108
SMART:SM00220SMR:F4JQX7STRING:3702.AT4G24480.1SUPFAM:SSF56112TAIR:AT4G24480UniGene:At.32340UniProt:F4JQX7
Coordinates (TAIR10) chr4:+:12650410..12654755
Molecular Weight (calculated) 107216.00 Da
IEP (calculated) 6.62
GRAVY (calculated) -0.43
Length 956 amino acids
Sequence (TAIR10)
(BLAST)
001: MPHRTTYFFP RQFPDRGFDS FSLKNDHDKK KSSSNVGESF GFQRDNKSNG VGEDSNKEKE STVFSSNPLL SKSSAVSDLF SDDRKSEKKH QQQLAAFYEW
101: LAEKKANLSR SSSTTTTHGR GVKPTRFSMS SDADEERELL LSSPADPAPL PATSSPDSII DSARTVNIHE RNIDRSFDRE VSLPRMSSES SFAGSFFSGT
201: TVDGNFSNFS SHTDARETST TTLVSVNKEE EEVEVREQGK EQSLAQKSRE GYYLQVTLAK WLSSQANLAC ESVHIQSTES ISYRFWVSGC LSYSDKISDG
301: FYSILGMDPY LWLMCNNSED GKRIPSLLLL KETEPNDTSM EVVLIDRRED SRLKELEDKA HELYCSSDNM LVLVEKLGRL VAVYMGGNFQ VEQGDLQKRW
401: KLVSNRLKEF RKCIILPIGS LTMGLCRHRA ILFKKLADYI GLPCRIARGC RYCKESHQSS CLVKIDDDRK LSREYVVDLI GEPGNVHDPD SSINGETQCQ
501: IPSPLQMSHL TDFSRPCVHS TSPCQTVESK TSRTLSENIQ RSGSQGQVHK EFELPDNAGT VCCAHIDQTC CAKVSSMVLT ESVLRALPLD IPNLSEEKIA
601: PQETCKEETV LLEDPTAMKQ PNLSVEPEIV EADTRKDKKG RLPVDAISPY LTIEPSLASD WLEVSWNELH IKERVGAGSF GTVHRAEWHG SDVAVKILSI
701: QDFHDDQFRE FLREVCKQAV AIMKRVRHPN VVLFMGAVTE RPRLSIITEY LPRGSLFRLI HRPASGELLD QRRRLRMALD VAKGLNYLHC LNPPVVHWDL
801: KSPNLLVDKN WTVKVCDFGL SRFKANTFIP SKSVAGTPEW MAPEFLRGEP TNEKSDVYSF GVVLWELITL QQPWNGLSPA QVVGAVAFQN RRLIIPPNTS
901: PVLVSLMEAC WADEPSQRPA FGSIVDTLKK LLKSPVQLIQ MGGDKGVIPT KSAPIL
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)