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AT4G24300.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
mitochondrion 0.924
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Peptidase C50, separase
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Peptidase C50, separase; FUNCTIONS IN: peptidase activity; INVOLVED IN: proteolysis; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Peptidase C50, separase (InterPro:IPR005314); BEST Arabidopsis thaliana protein match is: homolog of separase (TAIR:AT4G22970.2); Has 13 Blast hits to 13 proteins in 5 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 13; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:GQT-594-MONOMEReggNOG:COG5155eggNOG:KOG1849EMBL:AL078637EMBL:AL161561EMBL:CP002687EnsemblPlants:AT4G24300
EnsemblPlants:AT4G24300.1entrez:828533GeneID:828533Gramene:AT4G24300.1KEGG:ath:AT4G24300OMA:GECALSVPhylomeDB:Q9STW4
PIR:T09893Proteomes:UP000006548RefSeq:NP_194161.1STRING:3702.AT4G24300.1TAIR:AT4G24300UniGene:At.54500UniProt:Q9STW4
Coordinates (TAIR10) chr4:-:12598980..12600213
Molecular Weight (calculated) 16614.30 Da
IEP (calculated) 9.17
GRAVY (calculated) 0.05
Length 145 amino acids
Sequence (TAIR10)
(BLAST)
001: MVVASIVRSV AMSRDMNDLQ YLRGISLLQG LKPWLRYLDA NEHHKFLKLV LSDMGECALS VIREAERFDE AFVHSFCIST LEEYSVSPLP KCHFYKFSRQ
101: VLSLLFPSKE AKTSLNLKIM MSVLKFVAGE FQNQQSSSRV RYAAV
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)