AT4G24300.1
|
Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:mitochondrion 0.924 What is SUBAcon? |
|
||||||||||||||||||||||||
| Experimental Localisations and PPI |
|
||||||||||||||||||||||||
|
SUBAcon links
AGI-AGI relationships |
|
||||||||||||||||||||||||
| Description (TAIR10) | protein_coding : Peptidase C50, separase | ||||||||||||||||||||||||
| Curator Summary (TAIR10) |
|||||||||||||||||||||||||
| Computational Description (TAIR10) |
Peptidase C50, separase; FUNCTIONS IN: peptidase activity; INVOLVED IN: proteolysis; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Peptidase C50, separase (InterPro:IPR005314); BEST Arabidopsis thaliana protein match is: homolog of separase (TAIR:AT4G22970.2); Has 13 Blast hits to 13 proteins in 5 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 13; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | ||||||||||||||||||||||||
| Protein Annotations |
|
||||||||||||||||||||||||
| Coordinates (TAIR10) | chr4:-:12598980..12600213 | ||||||||||||||||||||||||
| Molecular Weight (calculated) | 16614.30 Da | ||||||||||||||||||||||||
| IEP (calculated) | 9.17 | ||||||||||||||||||||||||
| GRAVY (calculated) | 0.05 | ||||||||||||||||||||||||
| Length | 145 amino acids | ||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MVVASIVRSV AMSRDMNDLQ YLRGISLLQG LKPWLRYLDA NEHHKFLKLV LSDMGECALS VIREAERFDE AFVHSFCIST LEEYSVSPLP KCHFYKFSRQ 101: VLSLLFPSKE AKTSLNLKIM MSVLKFVAGE FQNQQSSSRV RYAAV |
||||||||||||||||||||||||
| See Also |
|
||||||||||||||||||||||||
Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)