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AT4G24140.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
plasma membrane 0.802
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : alpha/beta-Hydrolases superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: hydrolase activity; LOCATED IN: endomembrane system; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT1G64670.1); Has 5648 Blast hits to 5647 proteins in 1115 species: Archae - 17; Bacteria - 3672; Metazoa - 316; Fungi - 186; Plants - 193; Viruses - 6; Other Eukaryotes - 1258 (source: NCBI BLink).
Protein Annotations
eggNOG:COG0596eggNOG:KOG1454EMBL:AC002343EMBL:AL109619EMBL:AL161560EMBL:AY090352EMBL:BT002263
EMBL:CP002687EnsemblPlants:AT4G24140EnsemblPlants:AT4G24140.1entrez:828514ESTHER:arath-T19F06.6Gene3D:3.40.50.1820GeneID:828514
GO:GO:0016787Gramene:AT4G24140.1hmmpanther:PTHR10992hmmpanther:PTHR10992:SF881HOGENOM:HOG000243550InterPro:IPR000073InterPro:IPR029058
KEGG:ath:AT4G24140MEROPS:S33.A26OMA:CTSWASTPfam:PF00561PhylomeDB:O22977PIR:T13462Proteomes:UP000006548
RefSeq:NP_194145.1SMR:O22977STRING:3702.AT4G24140.1SUPFAM:SSF53474TAIR:AT4G24140UniGene:At.32375UniProt:O22977
Coordinates (TAIR10) chr4:-:12530032..12533664
Molecular Weight (calculated) 56214.20 Da
IEP (calculated) 9.09
GRAVY (calculated) -0.13
Length 498 amino acids
Sequence (TAIR10)
(BLAST)
001: MAVMKIKGAA TVAGTWLNEA VSFVVFCILD IVDSFLCLLY KAADYLFEAE WKPCYCLSDK EPITTTRGKI LLSHNNGESK ILTLSPLQEL GGRSKIELED
101: ISETLYTRPS LISDISTISV NELNKRFVKV TRSESECSGH NEKTKNKRRR SLTKSSLTVN FTVVEMLRGK IRPQNLNHDI SRWSDCDCGF CTSWASTSDK
201: NHSLFVKTQI PNGVTAKEDV LFIHGFISSS AFWTETVFPS LSASSSTHRL FAVDLLGFGK SPKPADSLYT LREHVEMIEK SVLHKYNVKS FHIVAHSLGC
301: ILALSLAARH GGLIKSLTLL APPYYPVPKG EKKPRQYVMK KVAPRKVWPP IALGASMACW YEHISRTICL LICKHHRVWQ FIAGVLTRNN RTVNFLIEGF
401: MCHTHNAAWH TLHNIICGTG SKLDTYLDIV RDKLKCNVTI FHGGDDELIP VECSYNVKQR IPRARVKVIE HKDHITMVVG RQDEFARELQ EIWKTSSC
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)