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AT4G23770.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
nucleus 0.904
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G23780.1); Has 17 Blast hits to 17 proteins in 6 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 13; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410JVHWeggNOG:ENOG41105W9EMBL:BT004285EMBL:BT005614
EMBL:CP002687EnsemblPlants:AT4G23770EnsemblPlants:AT4G23770.1entrez:828477
GeneID:828477Gramene:AT4G23770.1HOGENOM:HOG000147059IntAct:Q84JI2
KEGG:ath:AT4G23770ncoils:CoilOMA:IEKWENKPhylomeDB:Q84JI2
Proteomes:UP000006548RefSeq:NP_194108.2STRING:3702.AT4G23770.1TAIR:AT4G23770
UniGene:At.32408UniProt:Q84JI2
Coordinates (TAIR10) chr4:-:12383514..12384050
Molecular Weight (calculated) 16138.10 Da
IEP (calculated) 5.12
GRAVY (calculated) -0.80
Length 138 amino acids
Sequence (TAIR10)
(BLAST)
001: MSSRLDQLVN KYNKSCENVS FAEHMILKDK YESLVIEHES LIKTLELLEK THGFTVEDLV TKQKEALEKK EVIEKWENKF GEMEKKLKTV ERSIEYIMSV
101: DVQTGVDSDM STSEDDDGNR RQRKGRLINS SDHDHFIL
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)