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AT4G23760.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
mitochondrion 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Cox19-like CHCH family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Cox19-like CHCH family protein; CONTAINS InterPro DOMAIN/s: CHCH (InterPro:IPR010625); Has 3 Blast hits to 3 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 3; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410J749eggNOG:ENOG410ZCKVEMBL:CP002687EnsemblPlants:AT4G23760
EnsemblPlants:AT4G23760.1entrez:828476Gene3D:1.10.810.10GeneID:828476
Gramene:AT4G23760.1hmmpanther:PTHR37750hmmpanther:PTHR37750:SF1InParanoid:F4JPC0
InterPro:IPR009069KEGG:ath:AT4G23760PaxDb:F4JPC0ProteinModelPortal:F4JPC0
Proteomes:UP000006548RefSeq:NP_194107.2STRING:3702.AT4G23760.1SUPFAM:SSF47072
TAIR:AT4G23760UniGene:At.32409UniProt:F4JPC0
Coordinates (TAIR10) chr4:+:12381845..12382850
Molecular Weight (calculated) 12937.60 Da
IEP (calculated) 8.66
GRAVY (calculated) -0.25
Length 116 amino acids
Sequence (TAIR10)
(BLAST)
001: MNSDGLYGPL KILFFFESSP PRSWVIRLTG NIFVSLRNPS LGFIPSMEKQ STQPICGQEA LQLLNCVAES PFDQEKCVRF LQSLRECVLS KKVKKFSIPS
101: QDHDSEGAAS ATKRPS
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)