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AT4G23710.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
golgi 0.500
vacuole 0.500
ASURE: golgi,vacuole
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : vacuolar ATP synthase subunit G2
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
vacuolar ATP synthase subunit G2 (VAG2); FUNCTIONS IN: hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances; INVOLVED IN: proton transport; LOCATED IN: plasma membrane, vacuole; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Vacuolar (H+)-ATPase G subunit (InterPro:IPR005124); BEST Arabidopsis thaliana protein match is: vacuolar membrane ATPase 10 (TAIR:AT3G01390.2); Has 639 Blast hits to 639 proteins in 196 species: Archae - 2; Bacteria - 5; Metazoa - 338; Fungi - 118; Plants - 124; Viruses - 0; Other Eukaryotes - 52 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG4111XX0eggNOG:KOG1772EMBL:AJ005902EMBL:AL035394EMBL:AL161560EMBL:BT003107EMBL:CP002687
EnsemblPlants:AT4G23710EnsemblPlants:AT4G23710.1entrez:828471ExpressionAtlas:O82629GeneID:828471Genevisible:O82629GO:GO:0005773
GO:GO:0005774GO:GO:0005794GO:GO:0015992GO:GO:0016471GO:GO:0016820Gramene:AT4G23710.1hmmpanther:PTHR12713
HOGENOM:HOG000186416InParanoid:O82629InterPro:IPR005124KEGG:ath:AT4G23710KO:K02152ncoils:CoilOMA:RTAKMTR
PANTHER:PTHR12713PaxDb:O82629Pfam:O82629Pfam:PF03179PhylomeDB:O82629PIR:T05603PIR:T51826
PRIDE:O82629PRO:PR:O82629ProteinModelPortal:O82629Proteomes:UP000006548RefSeq:NP_194102.1SMR:O82629STRING:3702.AT4G23710.1
TAIR:AT4G23710tair10-symbols:VAG2tair10-symbols:VATG2tair10-symbols:VHA-G2TCDB:3.A.2.2.5TIGRfam:TIGR01147TIGRFAMs:TIGR01147
UniGene:At.161UniProt:O82629UniProt:Q0WT72
Coordinates (TAIR10) chr4:+:12350577..12351354
Molecular Weight (calculated) 11742.80 Da
IEP (calculated) 5.28
GRAVY (calculated) -0.81
Length 106 amino acids
Sequence (TAIR10)
(BLAST)
001: MESAGIQQLL AAEREAQQIV NAARTAKMTR LKQAKEEAET EVAEHKTSTE QGFQRKLEAT SGDSGANVKR LEQETDAKIE QLKNEATRIS KDVVDMLLKN
101: VTTVNN
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)