AT4G23320.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : cysteine-rich RLK (RECEPTOR-like protein kinase) 24 | ||||||||||||
| Curator Summary (TAIR10) |
Encodes a cysteine-rich receptor-like protein kinase. | ||||||||||||
| Computational Description (TAIR10) |
cysteine-rich RLK (RECEPTOR-like protein kinase) 24 (CRK24); FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; EXPRESSED IN: central cell, stem, cauline leaf, leaf; EXPRESSED DURING: LP.06 six leaves visible; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Protein of unknown function DUF26 (InterPro:IPR002902), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: cysteine-rich RLK (RECEPTOR-like protein kinase) 21 (TAIR:AT4G23290.1); Has 117493 Blast hits to 116145 proteins in 4428 species: Archae - 91; Bacteria - 13531; Metazoa - 43566; Fungi - 10142; Plants - 32571; Viruses - 400; Other Eukaryotes - 17192 (source: NCBI BLink). | ||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr4:-:12189182..12191977 | ||||||||||||
| Molecular Weight (calculated) | 49456.00 Da | ||||||||||||
| IEP (calculated) | 9.70 | ||||||||||||
| GRAVY (calculated) | -0.18 | ||||||||||||
| Length | 437 amino acids | ||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MHLLFCFDEA STRFVTTLEE KYQFICYRRL LHDMDRGTSK QSIWSRDVCP SRDLSLQNCT KCLQQNVVEY RSCCRGRQGG IILRPSCFIR WELYPFLGLF 101: DNIRPRQKDG KSISTGAIVA IIVVPILLLA LGVGLWKRRK AYKTKTTKIA DDITTSGSLQ FEFKAIEAAT CNFHNVNKLG HGGFGEVYKG TFPNGTEVAV 201: KRLSKTSGQG EEEFKNEVFL VAKLQHRNLV KLLGYAVKGD EKILVYEFLP NKSLDHFLFD PVKKGQLDWT RRYNIINGIT RGIVYLHQDS RLTIIHRDLK 301: AGNILLDADM NPKIVDFGVA RNFRVDQTEA TTARVVGTIG YMPPEYVTNG QFSTKSDVYS FGVLILEIIE NPADRPTMST VFHMLTNTSI TLHVPQPPGF 401: VFRVRFKPNP LADRLQRGPS TSMSFSCSVS VTCVSPR |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)