suba logo
AT4G23300.1
Subcellular Consensus
(Prediction and Experimental)

min: heatmap :max

.
SUBAcon:
plasma membrane 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : cysteine-rich RLK (RECEPTOR-like protein kinase) 22
Curator
Summary (TAIR10)
Encodes a cysteine-rich receptor-like protein kinase.
Computational
Description (TAIR10)
cysteine-rich RLK (RECEPTOR-like protein kinase) 22 (CRK22); FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Protein of unknown function DUF26 (InterPro:IPR002902), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: cysteine-rich RLK (RECEPTOR-like protein kinase) 11 (TAIR:AT4G23190.1); Has 103695 Blast hits to 102621 proteins in 3245 species: Archae - 86; Bacteria - 11059; Metazoa - 38425; Fungi - 8064; Plants - 31240; Viruses - 326; Other Eukaryotes - 14495 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT4G23300-MONOMEREC:2.7.11.-eggNOG:COG0515EMBL:AK176570EMBL:AL022347EMBL:AL161559EMBL:BT010572
EMBL:CP002687EnsemblPlants:AT4G23300EnsemblPlants:AT4G23300.1entrez:828429Gene3D:2.60.120.200GeneID:828429Genevisible:Q6NQ87
GO:GO:0004674GO:GO:0005524GO:GO:0005886GO:GO:0006468GO:GO:0009506GO:GO:0016021GO:GO:0042742
Gramene:AT4G23300.1hmmpanther:PTHR27002HOGENOM:HOG000116550InParanoid:Q6NQ87InterPro:IPR000719InterPro:IPR001245InterPro:IPR002902
InterPro:IPR008271InterPro:IPR011009InterPro:IPR013320InterPro:IPR017441KEGG:ath:AT4G23300OMA:TTNSLQYPaxDb:Q6NQ87
Pfam:PF01657Pfam:PF07714Pfam:Q6NQ87Pfscan:PS50011Pfscan:PS51473PhylomeDB:Q6NQ87PIR:T04847
PRIDE:Q6NQ87PRO:PR:Q6NQ87PROSITE:PS00107PROSITE:PS00108PROSITE:PS50011PROSITE:PS51473ProteinModelPortal:Q6NQ87
Proteomes:UP000006548RefSeq:NP_194061.2scanprosite:PS00107scanprosite:PS00108SMR:Q6NQ87STRING:3702.AT4G23300.1SUPFAM:SSF56112
TAIR:AT4G23300tair10-symbols:CRK22TMHMM:TMhelixUniGene:At.32446UniProt:Q6NQ87
Coordinates (TAIR10) chr4:+:12182002..12184531
Molecular Weight (calculated) 73852.90 Da
IEP (calculated) 7.51
GRAVY (calculated) -0.18
Length 660 amino acids
Sequence (TAIR10)
(BLAST)
001: MKQRSFLSIL CFILLAFGVA SVSAQTCIEN RKYFTPNGTY DSNRRLILSS LPNNTASQDG FYYGSIGEEQ DRVYALGMCI PRSTPSDCFN CIKGAAGWLI
101: QDCVNQTDAY YWALDPTLCL VRYSNISFSG SAAFWEIEPQ YLVLNTATIA SDLTDFKNIW EDLTSRTITA ASAARSTPSS SDNHYRVDFA NLTKFQNIYA
201: LMQCTPDISS DECNNCLQRG VLEYQSCCGN NTGGYVMRPI CFFRWQLFTF SKAFHNITLA TPPKPPMNVP RPPSVGHGAN TTDNDSRGVS AGIVVVITVP
301: AVVIVLILVV LGFFICWRRK SLQRTEFESD SDVSTTNSLQ YEFKTIEAAT NKFSKSNKLG EGRFGEVYKG KFSNGTEVAV KRLSKVSGQD TKKFRNEAVL
401: VSKIQHRNLA RLLGFCLQGD GKFLIYEFVL NKSLDYFLFD PEKQGELDWT RRYKIIGGIA QGILHLHQDP QLTIIYRDFK ASNILLDADM NPKISDFGMA
501: TVFGMEESRG NTNWIAETFV YMSPEYAVHG KFSMKSDVYS FGILILEIIS GKKNSSLYQN DETTTAGNLV TYAWRLWRNG SQLKLLDSSI GRNYQSNEVT
601: RCIHIALLCV QENPEDRPKL STIVSMLTSN TISVPAPGIP GFFPQSRREL DPLSEGLESG
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)