AT4G23290.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 0.612 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : cysteine-rich RLK (RECEPTOR-like protein kinase) 21 | ||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
Encodes a cysteine-rich receptor-like protein kinase. | ||||||||||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
cysteine-rich RLK (RECEPTOR-like protein kinase) 21 (CRK21); FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: mitochondrion; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Protein of unknown function DUF26 (InterPro:IPR002902), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Concanavalin A-like lectin/glucanase (InterPro:IPR008985); BEST Arabidopsis thaliana protein match is: cysteine-rich RLK (RECEPTOR-like protein kinase) 30 (TAIR:AT4G11460.1); Has 118335 Blast hits to 116928 proteins in 4420 species: Archae - 92; Bacteria - 13445; Metazoa - 43452; Fungi - 10162; Plants - 33529; Viruses - 391; Other Eukaryotes - 17264 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr4:-:12177910..12180669 | ||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 66385.40 Da | ||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 8.42 | ||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.24 | ||||||||||||||||||||||||||||||||||||||||
| Length | 600 amino acids | ||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MLSSLPSRVK DNEGFYKTPF KPGPNIAHGL GMCSRGTTTQ DCSDCITSVS HTLLHTCPNQ AEAIDWSSGD SLCLALMDRV INKVDGSLYA NSIQELGSFP 101: FRSIYAIAQC NKDLTKLNCE KCLQHLRIDN RSCCRGIQVG YIARTSCFMR WDLQPFLGLF INGMLPTPPS ELDNGHSNTT KKDGKNISTG SIVAIAVVSV 201: VVSTVLLALG YAVSRRRKAY QSFASENGYF SVSRRPRRPY GTASPDDATD DLTASSGSLR FDFRAIKAAT SNFHKSNKLG HGGFGAVYKG MFPNGTEVAA 301: KRLSKPSDQG EPEFKNEVLL VARLQHKNLV GLLGFSVEGE EKILVYEFVP NKSLDHFLFD PIKRVQLDWP RRHNIIEGIT RGILYLHQDS RLTIIHRDLK 401: ASNILLDAEM NPKIADFGLA RNFRVNQTEA NTGRVVGTFG YMPPEYVANG QFSTKSDVYS FGVLILEIIG GKKNSSFHQI DGSVSNLVTH VWRLRNNGSL 501: LELVDPAIGE NYDKDEVIRC IHIGLLCVQE NPDDRPSMST IFRMLTNVSI TLPVPQPPGF FFRERSEPNP LAERLLPGPS TSMSFTCSVD DASITSVRPR |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)