suba logo
AT4G23290.1
Subcellular Consensus
(Prediction and Experimental)

min: heatmap :max

.
SUBAcon:
plasma membrane 0.677
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : cysteine-rich RLK (RECEPTOR-like protein kinase) 21
Curator
Summary (TAIR10)
Encodes a cysteine-rich receptor-like protein kinase.
Computational
Description (TAIR10)
cysteine-rich RLK (RECEPTOR-like protein kinase) 21 (CRK21); FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: mitochondrion; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Protein of unknown function DUF26 (InterPro:IPR002902), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Concanavalin A-like lectin/glucanase (InterPro:IPR008985); BEST Arabidopsis thaliana protein match is: cysteine-rich RLK (RECEPTOR-like protein kinase) 30 (TAIR:AT4G11460.1); Has 118335 Blast hits to 116928 proteins in 4420 species: Archae - 92; Bacteria - 13445; Metazoa - 43452; Fungi - 10162; Plants - 33529; Viruses - 391; Other Eukaryotes - 17264 (source: NCBI BLink).
Protein Annotations
EMBL:CP002687EnsemblPlants:AT4G23290EnsemblPlants:AT4G23290.1entrez:828428ExpressionAtlas:F4JNH7Gene3D:2.60.120.200GeneID:828428
GO:GO:0004674GO:GO:0005524GO:GO:0016021Gramene:AT4G23290.1hmmpanther:PTHR27002InterPro:IPR000719InterPro:IPR002902
InterPro:IPR008271InterPro:IPR011009InterPro:IPR013320InterPro:IPR017441Pfam:PF00069Pfam:PF01657Pfscan:PS50011
Pfscan:PS51473PRIDE:F4JNH7PROSITE:PS00107PROSITE:PS00108PROSITE:PS50011PROSITE:PS51473ProteinModelPortal:F4JNH7
Proteomes:UP000006548RefSeq:NP_849550.1scanprosite:PS00107scanprosite:PS00108SMART:SM00220SMR:F4JNH7SUPFAM:SSF56112
TAIR:AT4G23290tair10-symbols:CRK21TMHMM:TMhelixUniGene:At.32447UniProt:F4JNH7
Coordinates (TAIR10) chr4:-:12177910..12180669
Molecular Weight (calculated) 66385.40 Da
IEP (calculated) 8.42
GRAVY (calculated) -0.24
Length 600 amino acids
Sequence (TAIR10)
(BLAST)
001: MLSSLPSRVK DNEGFYKTPF KPGPNIAHGL GMCSRGTTTQ DCSDCITSVS HTLLHTCPNQ AEAIDWSSGD SLCLALMDRV INKVDGSLYA NSIQELGSFP
101: FRSIYAIAQC NKDLTKLNCE KCLQHLRIDN RSCCRGIQVG YIARTSCFMR WDLQPFLGLF INGMLPTPPS ELDNGHSNTT KKDGKNISTG SIVAIAVVSV
201: VVSTVLLALG YAVSRRRKAY QSFASENGYF SVSRRPRRPY GTASPDDATD DLTASSGSLR FDFRAIKAAT SNFHKSNKLG HGGFGAVYKG MFPNGTEVAA
301: KRLSKPSDQG EPEFKNEVLL VARLQHKNLV GLLGFSVEGE EKILVYEFVP NKSLDHFLFD PIKRVQLDWP RRHNIIEGIT RGILYLHQDS RLTIIHRDLK
401: ASNILLDAEM NPKIADFGLA RNFRVNQTEA NTGRVVGTFG YMPPEYVANG QFSTKSDVYS FGVLILEIIG GKKNSSFHQI DGSVSNLVTH VWRLRNNGSL
501: LELVDPAIGE NYDKDEVIRC IHIGLLCVQE NPDDRPSMST IFRMLTNVSI TLPVPQPPGF FFRERSEPNP LAERLLPGPS TSMSFTCSVD DASITSVRPR
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)