suba logo
AT4G23270.1
Subcellular Consensus
(Prediction and Experimental)

min: heatmap :max

.
SUBAcon:
plasma membrane 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : cysteine-rich RLK (RECEPTOR-like protein kinase) 19
Curator
Summary (TAIR10)
Encodes a cysteine-rich receptor-like protein kinase.
Computational
Description (TAIR10)
cysteine-rich RLK (RECEPTOR-like protein kinase) 19 (CRK19); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, defense response to bacterium, response to salicylic acid stimulus; LOCATED IN: plasma membrane; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Protein of unknown function DUF26 (InterPro:IPR002902), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: cysteine-rich RLK (RECEPTOR-like protein kinase) 20 (TAIR:AT4G23280.1); Has 120138 Blast hits to 118523 proteins in 4474 species: Archae - 103; Bacteria - 13354; Metazoa - 44588; Fungi - 10215; Plants - 33864; Viruses - 408; Other Eukaryotes - 17606 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT4G23270-MONOMERBioGrid:13715EC:2.7.11.-eggNOG:COG0515eggNOG:ENOG410J9NTEMBL:AK118799EMBL:AL022347
EMBL:AL161559EMBL:CP002687EnsemblPlants:AT4G23270EnsemblPlants:AT4G23270.1entrez:828426Gene3D:2.60.120.200GeneID:828426
Genevisible:Q8GWJ7GO:GO:0004674GO:GO:0005524GO:GO:0005886GO:GO:0006468GO:GO:0009506GO:GO:0009751
GO:GO:0016021GO:GO:0042742hmmpanther:PTHR27002HOGENOM:HOG000116550InParanoid:Q8GWJ7InterPro:IPR000719InterPro:IPR001245
InterPro:IPR002902InterPro:IPR008271InterPro:IPR011009InterPro:IPR013320InterPro:IPR017441iPTMnet:Q8GWJ7KEGG:ath:AT4G23270
OMA:ICCNESHPaxDb:Q8GWJ7Pfam:PF01657Pfam:PF07714Pfam:Q8GWJ7Pfscan:PS50011Pfscan:PS51473
PhylomeDB:Q8GWJ7PIR:T04844PRIDE:Q8GWJ7PRO:PR:Q8GWJ7PROSITE:PS00107PROSITE:PS00108PROSITE:PS50011
PROSITE:PS51473ProteinModelPortal:Q8GWJ7Proteomes:UP000006548RefSeq:NP_194058.2scanprosite:PS00107scanprosite:PS00108SMART:SM00220
SMR:Q8GWJ7STRING:3702.AT4G23270.1SUPFAM:SSF56112TAIR:AT4G23270tair10-symbols:CRK19TMHMM:TMhelixUniGene:At.45988
UniProt:Q8GWJ7
Coordinates (TAIR10) chr4:+:12171133..12173794
Molecular Weight (calculated) 71623.80 Da
IEP (calculated) 7.30
GRAVY (calculated) -0.10
Length 645 amino acids
Sequence (TAIR10)
(BLAST)
001: MSSLISFIFL FLFSSITASA QNTFYLYHNC SVTTTFSSNS TYSTNLKTLL SSLSSLNASS YSTGFQTATA GQAPDRVTGL FLCRVDVSSE VCRSCVTFAV
101: NETLTRCPKD KEGVFYYEQC LLRYSNRNIV ATLNTDGGMF MQSARNPLSV KQDQFRDLVL TPMNLAAVEA ARSFKKWAVR KIDLNASQSL YGMVRCTPDL
201: REQDCLDCLK IGINQVTYDK IGGRILLPSC ASRYDNYAFY NESNVGTPQD SSPRPGKGGN SSVIIIAVVV PITVLFLLLV AVFSVRAKNK RTLNEKEPVA
301: EDGNDITTAG SLQFDFKAIE AATNCFLPIN KLGQGGFGEV YKGTLSSGLQ VAVKRLSKTS GQGEKEFENE VVVVAKLQHR NLVKLLGYCL EGEEKILVYE
401: FVPNKSLDHF LFDSTMKMKL DWTRRYKIIG GIARGILYLH QDSRLTIIHR DLKAGNILLD DDMNPKIADF GMARIFGMDQ TEAMTRRVVG TYGYMSPEYA
501: MYGQFSMKSD VYSFGVLVLE IISGMKNSSL YQMDESVGNL VTYTWRLWSN GSPSELVDPS FGDNYQTSEI TRCIHIALLC VQEDAEDRPT MSSIVQMLTT
601: SLIALAEPRP PGFFFRSKQE QAGPSIDSST HCSVDEASIT RVTPR
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)