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AT4G23260.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plasma membrane 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : cysteine-rich RLK (RECEPTOR-like protein kinase) 18
Curator
Summary (TAIR10)
Encodes a cysteine-rich receptor-like protein kinase.
Computational
Description (TAIR10)
cysteine-rich RLK (RECEPTOR-like protein kinase) 18 (CRK18); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: response to abscisic acid stimulus; LOCATED IN: endomembrane system; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Protein of unknown function DUF26 (InterPro:IPR002902), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: kinases;protein kinases (TAIR:AT4G23250.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT4G23260-MONOMERBioCyc:ARA:GQT-814-MONOMEREC:2.7.11.-eggNOG:COG0515
eggNOG:ENOG410IH0TEMBL:AL022347EMBL:AL161559EMBL:AY090250
EMBL:BT001060EMBL:CP002687EnsemblPlants:AT4G23260EnsemblPlants:AT4G23260.1
entrez:828425ExpressionAtlas:Q8RX80Gene3D:2.60.120.200GeneID:828425
Genevisible:Q8RX80GO:GO:0004674GO:GO:0005524GO:GO:0016021
Gramene:AT4G23260.1hmmpanther:PTHR27002HOGENOM:HOG000116550InParanoid:Q8RX80
InterPro:IPR000719InterPro:IPR001245InterPro:IPR002902InterPro:IPR008271
InterPro:IPR011009InterPro:IPR013320InterPro:IPR017441PaxDb:Q8RX80
Pfam:PF01657Pfam:PF07714Pfam:Q8RX80Pfscan:PS50011
Pfscan:PS51473PhylomeDB:Q8RX80PIR:T04843PRIDE:Q8RX80
PRO:PR:Q8RX80PROSITE:PS00107PROSITE:PS00108PROSITE:PS50011
PROSITE:PS51473ProteinModelPortal:Q8RX80Proteomes:UP000006548RefSeq:NP_194057.3
scanprosite:PS00107scanprosite:PS00108SMART:SM00220SMR:Q8RX80
STRING:3702.AT4G23260.1SUPFAM:SSF56112TAIR:AT4G23260tair10-symbols:CRK18
TMHMM:TMhelixUniGene:At.32453UniProt:Q8RX80
Coordinates (TAIR10) chr4:-:12167528..12170055
Molecular Weight (calculated) 72772.10 Da
IEP (calculated) 5.93
GRAVY (calculated) -0.06
Length 659 amino acids
Sequence (TAIR10)
(BLAST)
001: MATKSCELVL CFFVFFVISF SAISVSAQTC DNTTGTFIPN SPYDKNRRLI LSTLASNVTA QEGYFIGSIG IAPDQVFATG MCAPGSERDV CSLCIRSTSE
101: SLLQSCLDQA DAFFWSGEET LCLVRYANRP FSGLLVMDPL GAIFNTGELN TNQTVFDIEW NNLTSSMIAG ITSSSSGGNN SSKYYSDDIA LVPDFKNISA
201: LMQCTPDVSS EDCNTCLRQN VVDYDNCCRG HQGGVMSRPN CFFRWEVYPF SGAIDQINLP KSPPPSVTSP SPIANITKNG NRISGGKIAA IVVVTVVTII
301: LVVLGFVISN RRKQKQEMDL PTESVQFDLK TIESATSNFS ERNKLGKGGF GEVYKGMLMN GTEIAVKRLS KTSGQGEVEF KNEVVVVAKL QHINLVRLLG
401: FSLQGEEKLL VYEFVSNKSL DYFLFDPTKR NQLDWTMRRN IIGGITRGIL YLHQDSRLKI IHRDLKASNI LLDADMNPKI ADFGMARIFG VDQTVANTGR
501: VVGTFGYMSP EYVTHGQFSM KSDVYSFGVL ILEIISGKKN SSFYQMDGLV NNLVTYVWKL WENKSLHELL DPFINQDFTS EEVIRYIHIG LLCVQENPAD
601: RPTMSTIHQM LTNSSITLPV PLPPGFFFRN GPGSNPGQSN SKSFACSVDE ATITDVNPR
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)