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AT4G23180.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
plasma membrane 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : cysteine-rich RLK (RECEPTOR-like protein kinase) 10
Curator
Summary (TAIR10)
Encodes a receptor-like protein kinase. Naming convention from Chen et al 2003 (PMID 14756307)
Computational
Description (TAIR10)
cysteine-rich RLK (RECEPTOR-like protein kinase) 10 (CRK10); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Protein of unknown function DUF26 (InterPro:IPR002902), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: cysteine-rich RLK (RECEPTOR-like protein kinase) 8 (TAIR:AT4G23160.1); Has 124145 Blast hits to 122467 proteins in 4564 species: Archae - 110; Bacteria - 14159; Metazoa - 45299; Fungi - 10862; Plants - 34986; Viruses - 473; Other Eukaryotes - 18256 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT4G23180-MONOMERBioGrid:13706EC:2.7.11.-eggNOG:COG0515eggNOG:ENOG410IJDFEMBL:AF083790EMBL:AF224705
EMBL:AK117765EMBL:AL022347EMBL:AL161558EMBL:BT005954EMBL:CP002687EnsemblPlants:AT4G23180EnsemblPlants:AT4G23180.1
entrez:828417Gene3D:2.60.120.200GeneID:828417Genevisible:Q8GYA4GO:GO:0004674GO:GO:0005524GO:GO:0005886
GO:GO:0006468GO:GO:0009506GO:GO:0016021GO:GO:0042742hmmpanther:PTHR27002HOGENOM:HOG000116550InParanoid:Q8GYA4
IntAct:Q8GYA4InterPro:IPR000719InterPro:IPR001245InterPro:IPR002902InterPro:IPR008271InterPro:IPR011009InterPro:IPR013320
InterPro:IPR017441iPTMnet:Q8GYA4KEGG:ath:AT4G23180OMA:LMETEIAPaxDb:Q8GYA4Pfam:PF01657Pfam:PF07714
Pfam:Q8GYA4Pfscan:PS50011Pfscan:PS51473PIR:T04835PRIDE:Q8GYA4PRO:PR:Q8GYA4PROSITE:PS00107
PROSITE:PS00108PROSITE:PS50011PROSITE:PS51473ProteinModelPortal:Q8GYA4Proteomes:UP000006548RefSeq:NP_567679.2scanprosite:PS00107
scanprosite:PS00108SMART:SM00220SMR:Q8GYA4STRING:3702.AT4G23180.1SUPFAM:SSF56112TAIR:AT4G23180tair10-symbols:CRK10
tair10-symbols:RLK4TMHMM:TMhelixUniGene:At.19078UniProt:Q8GYA4
Coordinates (TAIR10) chr4:+:12138171..12140780
Molecular Weight (calculated) 74287.40 Da
IEP (calculated) 7.55
GRAVY (calculated) -0.17
Length 669 amino acids
Sequence (TAIR10)
(BLAST)
001: MRRNTDQESP IMSYYSSFFF LFLFSFLTSF RVSAQDPTYV YHTCQNTANY TSNSTYNNNL KTLLASLSSR NASYSTGFQN ATVGQAPDRV TGLFNCRGDV
101: STEVCRRCVS FAVNDTLTRC PNQKEATLYY DECVLRYSNQ NILSTLITTG GVILVNTRNV TSNQLDLLSD LVLPTLNQAA TVALNSSKKF GTRKNNFTAL
201: QSFYGLVQCT PDLTRQDCSR CLQLVINQIP TDRIGARIIN PSCTSRYEIY AFYTESAVPP PPPPPSISTP PVSAPPRSGK DGNSKVLVIA IVVPIIVAVL
301: LFIAGYCFLT RRARKSYYTP SAFAGDDITT ADSLQLDYRT IQTATDDFVE SNKIGQGGFG EVYKGTLSDG TEVAVKRLSK SSGQGEVEFK NEVVLVAKLQ
401: HRNLVRLLGF CLDGEERVLV YEYVPNKSLD YFLFDPAKKG QLDWTRRYKI IGGVARGILY LHQDSRLTII HRDLKASNIL LDADMNPKIA DFGMARIFGL
501: DQTEENTSRI VGTYGYMSPE YAMHGQYSMK SDVYSFGVLV LEIISGKKNS SFYQTDGAHD LVSYAWGLWS NGRPLELVDP AIVENCQRNE VVRCVHIGLL
601: CVQEDPAERP TLSTIVLMLT SNTVTLPVPR QPGLFFQSRI GKDPLDTDTT SKSLLGSVDD ASITDIHPR
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)