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AT4G23050.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
nucleus 0.760
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : PAS domain-containing protein tyrosine kinase family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
PAS domain-containing protein tyrosine kinase family protein; FUNCTIONS IN: protein serine/threonine/tyrosine kinase activity, protein kinase activity, signal transducer activity; INVOLVED IN: signal transduction, protein amino acid phosphorylation, regulation of transcription, DNA-dependent; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: PAC motif (InterPro:IPR001610), Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), PAS fold (InterPro:IPR013767), PAS (InterPro:IPR000014), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: PAS domain-containing protein tyrosine kinase family protein (TAIR:AT3G06640.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:GQT-2252-MONOMEReggNOG:COG0515eggNOG:KOG0192EMBL:AY056257EMBL:CP002687EnsemblPlants:AT4G23050EnsemblPlants:AT4G23050.1
entrez:828404ExpressionAtlas:Q93ZU3GeneID:828404GO:GO:0004674GO:GO:0005524GO:GO:0006355Gramene:AT4G23050.1
hmmpanther:PTHR23257hmmpanther:PTHR23257:SF434HOGENOM:HOG000233857InterPro:IPR000014InterPro:IPR000719InterPro:IPR001245InterPro:IPR008271
InterPro:IPR011009InterPro:IPR013767InterPro:IPR017441KEGG:ath:AT4G23050Pfam:PF00989Pfam:PF07714Pfscan:PS50011
Pfscan:PS50112PhylomeDB:Q93ZU3PRINTS:PR00109PROSITE:PS00107PROSITE:PS00108PROSITE:PS50011PROSITE:PS50112
Proteomes:UP000006548RefSeq:NP_567676.1scanprosite:PS00107scanprosite:PS00108SMART:SM00091SMART:SM00220SMR:Q93ZU3
STRING:3702.AT4G23050.2SUPFAM:SSF55785SUPFAM:SSF56112TAIR:AT4G23050TIGRfam:TIGR00229TIGRFAMs:TIGR00229UniGene:At.2385
UniProt:Q93ZU3
Coordinates (TAIR10) chr4:+:12080112..12083708
Molecular Weight (calculated) 82157.80 Da
IEP (calculated) 6.68
GRAVY (calculated) -0.56
Length 735 amino acids
Sequence (TAIR10)
(BLAST)
001: MAGNNSESSL YQVLVEWCQR METSQARLRE DVDDLLLQEE SRTGKESATG LETDTEKEAE VEVEAEAADS WDNPTATWER AVSGFYFADS AYRTLMDSMG
101: HAIHVTSAAS GEITFWSRSA ENLYHWYAEE VVGYRTIDVL VTEEYRNSLT GIRNRVCRGE TWTGQFPFQK KTGELFMALV TKSPVYENGE LVGVVTVSSD
201: ATLFNRMHPL SNEHQQQARS NNRHESNLRK HQWHLPRPQI AAASQVPVVP QYSSAVASNL ASKLLPQRNG DDSFNGNHNS RSRDENVPVV ASTTFEKYGS
301: LADKFLGKLQ RKITGSQGTE DNEPILRNGI NKSACGSGGS SKASNAVTCT AFRDNGNGKP KRAEVRISDV YGNGAEGLIH NGDRFQYIGN LGQSKPPRGL
401: ESGLVSGMRG TKMSDLNGEI EDAWNTRLSV DPLPILGVNS GRQQSPVNQR NNRLVTDSSC EIRWEDLQLG EEVGRGSFAA VHRGVWNGSD VAIKVYFDGD
501: YNAMTLTECK KEINIMKKLR HPNVLLFMGA VCTEEKSAII MEYMPRGSLF KILHNTNQPL DKKRRLRMAL DVARGMNYLH RRNPPIVHRD LKSSNLLVDK
601: NWNVKVGDFG LSKWKNATFL STKSGKGTPQ WMAPEVLRSE PSNEKCDVFS FGVILWELMT TLVPWDRLNS IQVVGVVGFM DRRLDLPEGL NPRIASIIQD
701: CWQTDPAKRP SFEELISQMM SLFRKPGSGA QEEDD
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)