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AT4G22830.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plastid 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2499 (InterPro:IPR019634); Has 319 Blast hits to 317 proteins in 103 species: Archae - 0; Bacteria - 147; Metazoa - 0; Fungi - 0; Plants - 64; Viruses - 0; Other Eukaryotes - 108 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410IZH6eggNOG:ENOG4111V3JEMBL:AK118821EMBL:BT005618
EMBL:CP002687EnsemblPlants:AT4G22830EnsemblPlants:AT4G22830.1entrez:828382
ExpressionAtlas:Q8GWI3GeneID:828382GO:GO:0016021Gramene:AT4G22830.1
hmmpanther:PTHR33833hmmpanther:PTHR33833:SF3HOGENOM:HOG000232831InterPro:IPR019634
Pfam:PF10693PhylomeDB:Q8GWI3Proteomes:UP000006548RefSeq:NP_194014.2
STRING:3702.AT4G22830.2TAIR:AT4G22830TMHMM:TMhelixUniGene:At.32491
UniProt:Q8GWI3
Coordinates (TAIR10) chr4:-:11990296..11991325
Molecular Weight (calculated) 20737.10 Da
IEP (calculated) 7.88
GRAVY (calculated) 0.42
Length 193 amino acids
Sequence (TAIR10)
(BLAST)
001: MAIASTATVL FCCAKPNFRR IHSESRPASS LTTSNEPVIR IRSRSLIHDP VALSGLIGTS LVAAAFITAG PDATALAAVV DSLQLSEPSN ALSLPTWAVH
101: VSSVVEWITA MALVWKYGER KGYESWKGLS WGMVPLLGGA LCACTWHFFY NDESLEVLVA LQAALTVFGN ITLCIAAFRI NKLSSKIEVS EKP
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)