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AT4G22620.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
mitochondrion 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : SAUR-like auxin-responsive protein family
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
SAUR-like auxin-responsive protein family ; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family (TAIR:AT4G12410.1); Has 1178 Blast hits to 1169 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1177; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410J2ZReggNOG:ENOG410YVYPEMBL:AL021635EMBL:AL033545EMBL:AL161557EMBL:CP002687EMBL:DQ446862
EnsemblPlants:AT4G22620EnsemblPlants:AT4G22620.1entrez:828358GeneID:828358GO:GO:0009733Gramene:AT4G22620.1hmmpanther:PTHR31374
hmmpanther:PTHR31374:SF56InterPro:IPR003676KEGG:ath:AT4G22620KO:K14488OMA:SCASRAIPfam:PF02519PhylomeDB:O49643
PIR:T04557Proteomes:UP000006548RefSeq:NP_193993.1STRING:3702.AT4G22620.1TAIR:AT4G22620UniGene:At.54479UniProt:O49643
Coordinates (TAIR10) chr4:+:11907631..11908113
Molecular Weight (calculated) 18569.10 Da
IEP (calculated) 11.73
GRAVY (calculated) -0.43
Length 160 amino acids
Sequence (TAIR10)
(BLAST)
001: MKRLRGFKIG HRFVKIFKWI IRSRRNQTGK RQCLTGILNP VTKIYSLARR CLRRGANRLC GGMKPGQTRL GNEPKTPTVP RGHLVVHVGE SGEDTRRVVV
101: PVIYFNHPLF GELLEQAERV YGFEQPGRIM IPCRVSDFEK VQMRIAAWDH CRRKSTFKIL
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)